3vr6
From Proteopedia
(Difference between revisions)
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==Crystal structure of AMP-PNP bound Enterococcus hirae V1-ATPase [bV1]== | ==Crystal structure of AMP-PNP bound Enterococcus hirae V1-ATPase [bV1]== | ||
- | <StructureSection load='3vr6' size='340' side='right' caption='[[3vr6]], [[Resolution|resolution]] 2.68Å' scene=''> | + | <StructureSection load='3vr6' size='340' side='right'caption='[[3vr6]], [[Resolution|resolution]] 2.68Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
- | <table><tr><td colspan='2'>[[3vr6]] is a 8 chain structure with sequence from [ | + | <table><tr><td colspan='2'>[[3vr6]] is a 8 chain structure with sequence from [https://en.wikipedia.org/wiki/Atcc_8043 Atcc 8043]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3VR6 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3VR6 FirstGlance]. <br> |
- | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ANP:PHOSPHOAMINOPHOSPHONIC+ACID-ADENYLATE+ESTER'>ANP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr> | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ANP:PHOSPHOAMINOPHOSPHONIC+ACID-ADENYLATE+ESTER'>ANP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr> |
- | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[3vr2|3vr2]], [[3vr3|3vr3]], [[3vr4|3vr4]], [[3vr5|3vr5]]</td></tr> | + | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[3vr2|3vr2]], [[3vr3|3vr3]], [[3vr4|3vr4]], [[3vr5|3vr5]]</div></td></tr> |
- | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">ntpA ([ | + | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">ntpA ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1354 ATCC 8043]), ntpB ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1354 ATCC 8043]), ntpD ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1354 ATCC 8043]), ntpG ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1354 ATCC 8043])</td></tr> |
- | <tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | <tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/Sodium-transporting_two-sector_ATPase Sodium-transporting two-sector ATPase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.6.3.15 3.6.3.15] </span></td></tr> |
- | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3vr6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3vr6 OCA], [https://pdbe.org/3vr6 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3vr6 RCSB], [https://www.ebi.ac.uk/pdbsum/3vr6 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3vr6 ProSAT]</span></td></tr> |
</table> | </table> | ||
== Function == | == Function == | ||
- | [[ | + | [[https://www.uniprot.org/uniprot/NTPG_ENTHA NTPG_ENTHA]] Involved in ATP-driven sodium extrusion. [[https://www.uniprot.org/uniprot/NTPA_ENTHA NTPA_ENTHA]] Involved in ATP-driven sodium extrusion. [[https://www.uniprot.org/uniprot/NTPB_ENTHA NTPB_ENTHA]] Involved in ATP-driven sodium extrusion. |
<div style="background-color:#fffaf0;"> | <div style="background-color:#fffaf0;"> | ||
== Publication Abstract from PubMed == | == Publication Abstract from PubMed == | ||
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</div> | </div> | ||
<div class="pdbe-citations 3vr6" style="background-color:#fffaf0;"></div> | <div class="pdbe-citations 3vr6" style="background-color:#fffaf0;"></div> | ||
+ | |||
+ | ==See Also== | ||
+ | *[[ATPase 3D structures|ATPase 3D structures]] | ||
== References == | == References == | ||
<references/> | <references/> | ||
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</StructureSection> | </StructureSection> | ||
[[Category: Atcc 8043]] | [[Category: Atcc 8043]] | ||
+ | [[Category: Large Structures]] | ||
[[Category: Sodium-transporting two-sector ATPase]] | [[Category: Sodium-transporting two-sector ATPase]] | ||
[[Category: Arai, S]] | [[Category: Arai, S]] |
Revision as of 18:59, 27 July 2022
Crystal structure of AMP-PNP bound Enterococcus hirae V1-ATPase [bV1]
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Categories: Atcc 8043 | Large Structures | Sodium-transporting two-sector ATPase | Arai, S | Ishizuka-Katsura, Y | Iwata, S | Kakinuma, Y | Mizutani, K | Murata, T | Ohsawa, N | Saijo, S | Shirouzu, M | Suzuki, K | Terada, T | Yamato, I | Yokoyama, S | Atp binding | Enterococcus hirae | Hydrolase | P-loop | Rotary motor | V-atpase