1ht3

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[[Image:1ht3.jpg|left|200px]]
[[Image:1ht3.jpg|left|200px]]
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{{Structure
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|PDB= 1ht3 |SIZE=350|CAPTION= <scene name='initialview01'>1ht3</scene>, resolution 1.8&Aring;
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The line below this paragraph, containing "STRUCTURE_1ht3", creates the "Structure Box" on the page.
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|SITE=
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|LIGAND= <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=HG:MERCURY+(II)+ION'>HG</scene>
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Peptidase_K Peptidase K], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.4.21.64 3.4.21.64] </span>
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or leave the SCENE parameter empty for the default display.
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|GENE=
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|DOMAIN=
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{{STRUCTURE_1ht3| PDB=1ht3 | SCENE= }}
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|RELATEDENTRY=[[1egq|1EGQ]], [[2prk|2PRK]], [[1cnm|1CNM]]
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|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1ht3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ht3 OCA], [http://www.ebi.ac.uk/pdbsum/1ht3 PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1ht3 RCSB]</span>
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'''MERCURY INDUCED MODIFICATIONS IN THE STEREOCHEMISTRY OF THE ACTIVE SITE THROUGH CYS-73 IN A SERINE PROTEASE: CRYSTAL STRUCTURE OF THE COMPLEX OF A PARTIALLY MODIFIED PROTEINASE K WITH MERCURY AT 1.8 A RESOLUTION'''
'''MERCURY INDUCED MODIFICATIONS IN THE STEREOCHEMISTRY OF THE ACTIVE SITE THROUGH CYS-73 IN A SERINE PROTEASE: CRYSTAL STRUCTURE OF THE COMPLEX OF A PARTIALLY MODIFIED PROTEINASE K WITH MERCURY AT 1.8 A RESOLUTION'''
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[[Category: Single protein]]
[[Category: Single protein]]
[[Category: Gourinath, S.]]
[[Category: Gourinath, S.]]
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[[Category: mercury]]
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[[Category: Mercury]]
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[[Category: proteinase k]]
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[[Category: Proteinase k]]
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[[Category: stereochemistry]]
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[[Category: Stereochemistry]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Fri May 2 19:12:13 2008''
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Mar 30 21:10:03 2008''
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Revision as of 16:12, 2 May 2008

Template:STRUCTURE 1ht3

MERCURY INDUCED MODIFICATIONS IN THE STEREOCHEMISTRY OF THE ACTIVE SITE THROUGH CYS-73 IN A SERINE PROTEASE: CRYSTAL STRUCTURE OF THE COMPLEX OF A PARTIALLY MODIFIED PROTEINASE K WITH MERCURY AT 1.8 A RESOLUTION


Overview

Proteinese K (PK) isolated from Tritirachium album Limber was crystallized with HgCl2 in excess, under microgravity conditions. The intensity data were collected at 4 degrees C to 1.8 A resolution and the final R-factor after refinement for all the reflections was 0.164. Mercury has been found at two sites with partial occupancies (0.4 and 0.6) which are at distances of 2.48 A and 2.58 A respectively from Cys-73 Sgamma. The Cys-73 in the enzyme structure is located close to the active site residue, His-69. This region is completely buried and is not accessible to the solvent. It is rather tightly packed. Therefore, the binding of mercury distorts the stereochemistry of the neighbouring residues including those belonging to the catalytic triad. As a result of this, the Ogamma of Ser-224 is displaced by 0.6 A which causes the inactivation of proteinase K by increasing the H-bond distance to 3.7 A between Ser-224 Ogamma and His-69 Nepsilon2.

About this Structure

1HT3 is a Single protein structure of sequence from Engyodontium album. Full crystallographic information is available from OCA.

Reference

Mercury induced modifications in the stereochemistry of the active site through Cys-73 in a serine protease--crystal structure of the complex of a partially modified proteinase K with mercury at 1.8 A resolution., Gourinath S, Degenhardt M, Eschenburg S, Moore K, Delucas LJ, Betzel C, Singh TP, Indian J Biochem Biophys. 2001 Oct;38(5):298-302. PMID:11886076 Page seeded by OCA on Fri May 2 19:12:13 2008

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