7vkc

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 1: Line 1:
==Crystal structure of a bacterial Ser/Thr kinase==
==Crystal structure of a bacterial Ser/Thr kinase==
-
<StructureSection load='7vkc' size='340' side='right'caption='[[7vkc]]' scene=''>
+
<StructureSection load='7vkc' size='340' side='right'caption='[[7vkc]], [[Resolution|resolution]] 1.46&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7VKC OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7VKC FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[7vkc]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7VKC OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7VKC FirstGlance]. <br>
-
</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7vkc FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7vkc OCA], [https://pdbe.org/7vkc PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7vkc RCSB], [https://www.ebi.ac.uk/pdbsum/7vkc PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7vkc ProSAT]</span></td></tr>
+
</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=SEP:PHOSPHOSERINE'>SEP</scene></td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7vkc FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7vkc OCA], [https://pdbe.org/7vkc PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7vkc RCSB], [https://www.ebi.ac.uk/pdbsum/7vkc PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7vkc ProSAT]</span></td></tr>
</table>
</table>
 +
<div style="background-color:#fffaf0;">
 +
== Publication Abstract from PubMed ==
 +
Toxin-antitoxin (TA) systems are ubiquitous genetic modules in bacteria and archaea. Here, we perform structural and biochemical characterization of the Legionella pneumophila effector Lpg2370, demonstrating that it is a Ser/Thr kinase. Together with two upstream genes, lpg2370 constitutes the tripartite HipBST TA. Notably, the toxin Lpg2370 (HipTLp) and the antitoxin Lpg2369 (HipSLp) correspond to the C-terminus and N-terminus of HipA from HipBA TA, respectively. By determining crystal structures of autophosphorylated HipTLp, its complex with AMP-PNP, and the structure of HipTLp-HipSLp complex, we identify residues in HipTLp critical for ATP binding and those contributing to its interactions with HipSLp. Structural analysis reveals that HipSLp binding induces a loop-to-helix shift in the P-loop of HipTLp, leading to the blockage of ATP binding and inhibition of the kinase activity. These findings establish the L. pneumophila effector Lpg2370 as the HipBST TA toxin and elucidate the molecular basis for HipT neutralization in HipBST TA.
 +
 +
Molecular mechanism of toxin neutralization in the HipBST toxin-antitoxin system of Legionella pneumophila.,Zhen X, Wu Y, Ge J, Fu J, Ye L, Lin N, Huang Z, Liu Z, Luo ZQ, Qiu J, Ouyang S Nat Commun. 2022 Jul 26;13(1):4333. doi: 10.1038/s41467-022-32049-x. PMID:35882877<ref>PMID:35882877</ref>
 +
 +
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
 +
</div>
 +
<div class="pdbe-citations 7vkc" style="background-color:#fffaf0;"></div>
 +
== References ==
 +
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Large Structures]]
[[Category: Large Structures]]
 +
[[Category: Ouyang, S Y]]
[[Category: Zhen, X]]
[[Category: Zhen, X]]
 +
[[Category: Kinase]]
 +
[[Category: Toxin]]
 +
[[Category: Toxin antitoxin]]

Revision as of 05:04, 3 August 2022

Crystal structure of a bacterial Ser/Thr kinase

PDB ID 7vkc

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools