3wn6

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==Crystal structure of alpha-amylase AmyI-1 from Oryza sativa==
==Crystal structure of alpha-amylase AmyI-1 from Oryza sativa==
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<StructureSection load='3wn6' size='340' side='right' caption='[[3wn6]], [[Resolution|resolution]] 2.16&Aring;' scene=''>
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<StructureSection load='3wn6' size='340' side='right'caption='[[3wn6]], [[Resolution|resolution]] 2.16&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[3wn6]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Japanese_rice Japanese rice]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3WN6 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3WN6 FirstGlance]. <br>
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<table><tr><td colspan='2'>[[3wn6]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Japanese_rice Japanese rice]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3WN6 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3WN6 FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=PEG:DI(HYDROXYETHYL)ETHER'>PEG</scene>, <scene name='pdbligand=TAR:D(-)-TARTARIC+ACID'>TAR</scene></td></tr>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=PEG:DI(HYDROXYETHYL)ETHER'>PEG</scene>, <scene name='pdbligand=TAR:D(-)-TARTARIC+ACID'>TAR</scene></td></tr>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">AMY1.1, AMY1A ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=39947 Japanese rice])</td></tr>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">AMY1.1, AMY1A ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=39947 Japanese rice])</td></tr>
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<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Alpha-amylase Alpha-amylase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.2.1.1 3.2.1.1] </span></td></tr>
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<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/Alpha-amylase Alpha-amylase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.2.1.1 3.2.1.1] </span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3wn6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3wn6 OCA], [http://pdbe.org/3wn6 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3wn6 RCSB], [http://www.ebi.ac.uk/pdbsum/3wn6 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3wn6 ProSAT]</span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3wn6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3wn6 OCA], [https://pdbe.org/3wn6 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3wn6 RCSB], [https://www.ebi.ac.uk/pdbsum/3wn6 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3wn6 ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
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[[http://www.uniprot.org/uniprot/AMY1_ORYSJ AMY1_ORYSJ]] Important for breakdown of endosperm starch during germination.
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[[https://www.uniprot.org/uniprot/AMY1_ORYSJ AMY1_ORYSJ]] Important for breakdown of endosperm starch during germination.
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
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==See Also==
==See Also==
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*[[Amylase|Amylase]]
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*[[Amylase 3D structures|Amylase 3D structures]]
== References ==
== References ==
<references/>
<references/>
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[[Category: Alpha-amylase]]
[[Category: Alpha-amylase]]
[[Category: Japanese rice]]
[[Category: Japanese rice]]
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[[Category: Large Structures]]
[[Category: Harada, K]]
[[Category: Harada, K]]
[[Category: Ishiyama, Y]]
[[Category: Ishiyama, Y]]

Revision as of 05:42, 3 August 2022

Crystal structure of alpha-amylase AmyI-1 from Oryza sativa

PDB ID 3wn6

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