3wu6
From Proteopedia
(Difference between revisions)
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==Oxidized E.coli Lon Proteolytic domain== | ==Oxidized E.coli Lon Proteolytic domain== | ||
| - | <StructureSection load='3wu6' size='340' side='right' caption='[[3wu6]], [[Resolution|resolution]] 1.80Å' scene=''> | + | <StructureSection load='3wu6' size='340' side='right'caption='[[3wu6]], [[Resolution|resolution]] 1.80Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[3wu6]] is a 6 chain structure with sequence from [ | + | <table><tr><td colspan='2'>[[3wu6]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Ecod1 Ecod1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3WU6 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3WU6 FirstGlance]. <br> |
| - | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr> | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr> |
| - | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[3wu3|3wu3]], [[3wu4|3wu4]], [[3wu5|3wu5]]</td></tr> | + | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[3wu3|3wu3]], [[3wu4|3wu4]], [[3wu5|3wu5]]</div></td></tr> |
| - | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">LON, ECDH1_3170, ECDH1ME8569_0424 ([ | + | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">LON, ECDH1_3170, ECDH1ME8569_0424 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=536056 ECOD1])</td></tr> |
| - | <tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | <tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/Endopeptidase_La Endopeptidase La], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.4.21.53 3.4.21.53] </span></td></tr> |
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3wu6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3wu6 OCA], [https://pdbe.org/3wu6 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3wu6 RCSB], [https://www.ebi.ac.uk/pdbsum/3wu6 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3wu6 ProSAT]</span></td></tr> |
</table> | </table> | ||
== Function == | == Function == | ||
| - | [[ | + | [[https://www.uniprot.org/uniprot/C9QQ79_ECOD1 C9QQ79_ECOD1]] ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner. Endogenous substrates include the regulatory proteins RcsA and SulA, the transcriptional activator SoxS, and UmuD. Its overproduction specifically inhibits translation trough at least two different pathways, one of them being the YoeB-YefM toxin-antitoxin system.[HAMAP-Rule:MF_01973] |
<div style="background-color:#fffaf0;"> | <div style="background-color:#fffaf0;"> | ||
== Publication Abstract from PubMed == | == Publication Abstract from PubMed == | ||
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[[Category: Ecod1]] | [[Category: Ecod1]] | ||
[[Category: Endopeptidase La]] | [[Category: Endopeptidase La]] | ||
| + | [[Category: Large Structures]] | ||
[[Category: Kukimoto-Niino, M]] | [[Category: Kukimoto-Niino, M]] | ||
[[Category: Muramatsu, T]] | [[Category: Muramatsu, T]] | ||
Revision as of 05:31, 10 August 2022
Oxidized E.coli Lon Proteolytic domain
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