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3wxm

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==Crystal structure of archaeal Pelota and GTP-bound EF1 alpha complex==
==Crystal structure of archaeal Pelota and GTP-bound EF1 alpha complex==
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<StructureSection load='3wxm' size='340' side='right' caption='[[3wxm]], [[Resolution|resolution]] 2.30&Aring;' scene=''>
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<StructureSection load='3wxm' size='340' side='right'caption='[[3wxm]], [[Resolution|resolution]] 2.30&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[3wxm]] is a 8 chain structure with sequence from [http://en.wikipedia.org/wiki/Aerpe Aerpe]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=3agj 3agj]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3WXM OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3WXM FirstGlance]. <br>
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<table><tr><td colspan='2'>[[3wxm]] is a 8 chain structure with sequence from [https://en.wikipedia.org/wiki/Aerpe Aerpe]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=3agj 3agj]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3WXM OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3WXM FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GTP:GUANOSINE-5-TRIPHOSPHATE'>GTP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GTP:GUANOSINE-5-TRIPHOSPHATE'>GTP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">tuf, APE_1844 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=272557 AERPE]), pelA, APE_1800.1 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=272557 AERPE])</td></tr>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">tuf, APE_1844 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=272557 AERPE]), pelA, APE_1800.1 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=272557 AERPE])</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3wxm FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3wxm OCA], [http://pdbe.org/3wxm PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3wxm RCSB], [http://www.ebi.ac.uk/pdbsum/3wxm PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3wxm ProSAT]</span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3wxm FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3wxm OCA], [https://pdbe.org/3wxm PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3wxm RCSB], [https://www.ebi.ac.uk/pdbsum/3wxm PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3wxm ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
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[[http://www.uniprot.org/uniprot/EF1A_AERPE EF1A_AERPE]] This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis (By similarity). [[http://www.uniprot.org/uniprot/PELO_AERPE PELO_AERPE]] May function in recognizing stalled ribosomes, interact with stem-loop structures in stalled mRNA molecules, and effect endonucleolytic cleavage of the mRNA. May play a role in the release non-functional ribosomes and degradation of damaged mRNAs. Has endoribonuclease activity (By similarity).
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[[https://www.uniprot.org/uniprot/EF1A_AERPE EF1A_AERPE]] This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis (By similarity). [[https://www.uniprot.org/uniprot/PELO_AERPE PELO_AERPE]] May function in recognizing stalled ribosomes, interact with stem-loop structures in stalled mRNA molecules, and effect endonucleolytic cleavage of the mRNA. May play a role in the release non-functional ribosomes and degradation of damaged mRNAs. Has endoribonuclease activity (By similarity).
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
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==See Also==
==See Also==
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*[[Elongation factor|Elongation factor]]
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*[[Elongation factor 3D structures|Elongation factor 3D structures]]
== References ==
== References ==
<references/>
<references/>
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</StructureSection>
</StructureSection>
[[Category: Aerpe]]
[[Category: Aerpe]]
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[[Category: Large Structures]]
[[Category: Ishitani, R]]
[[Category: Ishitani, R]]
[[Category: Kobayashi, K]]
[[Category: Kobayashi, K]]

Revision as of 05:34, 10 August 2022

Crystal structure of archaeal Pelota and GTP-bound EF1 alpha complex

PDB ID 3wxm

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