7dxi
From Proteopedia
(Difference between revisions)
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==Structure of Drosophila melanogaster GlcNAc-1-phosphotransferase== | ==Structure of Drosophila melanogaster GlcNAc-1-phosphotransferase== | ||
- | <StructureSection load='7dxi' size='340' side='right'caption='[[7dxi]]' scene=''> | + | <StructureSection load='7dxi' size='340' side='right'caption='[[7dxi]], [[Resolution|resolution]] 3.53Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
- | <table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7DXI OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7DXI FirstGlance]. <br> | + | <table><tr><td colspan='2'>[[7dxi]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7DXI OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7DXI FirstGlance]. <br> |
- | </td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7dxi FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7dxi OCA], [https://pdbe.org/7dxi PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7dxi RCSB], [https://www.ebi.ac.uk/pdbsum/7dxi PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7dxi ProSAT]</span></td></tr> | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene></td></tr> |
+ | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7dxi FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7dxi OCA], [https://pdbe.org/7dxi PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7dxi RCSB], [https://www.ebi.ac.uk/pdbsum/7dxi PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7dxi ProSAT]</span></td></tr> | ||
</table> | </table> | ||
+ | <div style="background-color:#fffaf0;"> | ||
+ | == Publication Abstract from PubMed == | ||
+ | GlcNAc-1-phosphotransferase catalyzes the initial step in the formation of the mannose-6-phosphate tag that labels approximately 60 lysosomal proteins for transport. Mutations in GlcNAc-1-phosphotransferase are known to cause lysosomal storage disorders such as mucolipidoses. However, the molecular mechanism of GlcNAc-1-phosphotransferase activity remains unclear. Mammalian GlcNAc-1-phosphotransferases are alpha2beta2gamma2 hexamers in which the core catalytic alpha- and beta-subunits are derived from the GNPTAB (N-acetylglucosamine-1-phosphate transferase subunits alpha and beta) gene. Here, we present the cryo-electron microscopy structure of the Drosophila melanogaster GNPTAB homolog, DmGNPTAB. We identified four conserved regions located far apart in the sequence that fold into the catalytic domain, which exhibits structural similarity to that of the UDP-glucose glycoprotein glucosyltransferase. Comparison with UDP-glucose glycoprotein glucosyltransferase also revealed a putative donor substrate-binding site, and the functional requirements of critical residues in human GNPTAB were validated using GNPTAB-knockout cells. Finally, we show that DmGNPTAB forms a homodimer that is evolutionarily conserved and that perturbing the dimer interface undermines the maturation and activity of human GNPTAB. These results provide important insights into GlcNAc-1-phosphotransferase function and related diseases. | ||
+ | |||
+ | Structural insights into how GlcNAc-1-phosphotransferase directs lysosomal protein transport.,Du S, Wang G, Zhang Z, Ma C, Gao N, Xiao J J Biol Chem. 2022 Mar;298(3):101702. doi: 10.1016/j.jbc.2022.101702. Epub 2022, Feb 9. PMID:35148990<ref>PMID:35148990</ref> | ||
+ | |||
+ | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | ||
+ | </div> | ||
+ | <div class="pdbe-citations 7dxi" style="background-color:#fffaf0;"></div> | ||
+ | == References == | ||
+ | <references/> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
[[Category: Large Structures]] | [[Category: Large Structures]] | ||
- | [[Category: Du S]] | + | [[Category: Du, S]] |
- | [[Category: Guopeng W]] | + | [[Category: Guopeng, W]] |
- | [[Category: Xiao J]] | + | [[Category: Xiao, J]] |
+ | [[Category: Glcnac-1-phosphotransferase]] | ||
+ | [[Category: Gnptab]] | ||
+ | [[Category: Sugar binding protein]] | ||
+ | [[Category: Transferase]] |
Revision as of 06:30, 18 August 2022
Structure of Drosophila melanogaster GlcNAc-1-phosphotransferase
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