4ptk
From Proteopedia
(Difference between revisions)
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==Crystal structure of Staphylococcal IMPase-I complex with 3Mg2+ and Phosphate== | ==Crystal structure of Staphylococcal IMPase-I complex with 3Mg2+ and Phosphate== | ||
- | <StructureSection load='4ptk' size='340' side='right'caption='[[4ptk]] | + | <StructureSection load='4ptk' size='340' side='right'caption='[[4ptk]]' scene=''> |
== Structural highlights == | == Structural highlights == | ||
- | <table><tr><td colspan='2'> | + | <table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4PTK OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4PTK FirstGlance]. <br> |
- | </td></tr> | + | </td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4ptk FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4ptk OCA], [https://pdbe.org/4ptk PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4ptk RCSB], [https://www.ebi.ac.uk/pdbsum/4ptk PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4ptk ProSAT]</span></td></tr> |
- | + | ||
- | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4ptk FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4ptk OCA], [https://pdbe.org/4ptk PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4ptk RCSB], [https://www.ebi.ac.uk/pdbsum/4ptk PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4ptk ProSAT]</span></td></tr> | + | |
</table> | </table> | ||
- | <div style="background-color:#fffaf0;"> | ||
- | == Publication Abstract from PubMed == | ||
- | Mg2+ -dependent, Li+ -sensitive phosphatases are a widely distributed family of enzymes with significant importance throughout the biological kingdom. Inositol monophosphatase (IMPase) is one of the important targets of Li+ -based therapeutics for manic depressive disorders. However, despite decades of intense research efforts, the precise mechanism of the Li+ -induced inhibition of IMPase remains obscured. In this study, we present the structural investigation of the Li+ binding site in staphylococcal IMPase-I (SaIMPase-I) using X-ray crystallography. Biochemical study evident common or overlapping binding site of Mg2+ and Li+ in the active site of SaIMPase-I. The crystal structure of SaIMPase-I ternary product complex shows a phosphate and three Mg2+ (namely Mg1, Mg2 and Mg3) in the active site. Since Li+ is virtually invisible in X-ray crystallography, the competitive displacement of Mg2+ ions from the SaIMPase-I ternary product complex as a function of an increasing LiCl concentration were employed to identify Li+ binding site. In this approach, the disappearing electron density of pre-occupied Mg2+ ions due to Li+ ions binding was traced and accordingly, the Mg2+ ion explicitly from the Mg2 binding site found to be replaced. Moreover, based on comparative detailed investigation of the phosphate orientation and coordination states of Mg2+ binding sites in enzyme-substrate and enzyme-product complexes, the inhibition mechanisms of Li+ and Mg2+ are proposed. This article is protected by copyright. All rights reserved. STRUCTURED DIGITAL ABSTRACT: SaIMPase-I and SaIMPase-I bind by x-ray crystallography (View interaction). | ||
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- | Structural Elucidation of the Binding Site and Mode of Inhibition of Li and Mg in Inositol Monophosphatase.,Dutta A, Bhattacharyya S, Dutta D, Das AK FEBS J. 2014 Sep 26. doi: 10.1111/febs.13070. PMID:25263816<ref>PMID:25263816</ref> | ||
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- | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | ||
- | </div> | ||
- | <div class="pdbe-citations 4ptk" style="background-color:#fffaf0;"></div> | ||
==See Also== | ==See Also== | ||
*[[Inositol monophosphatase 3D structures|Inositol monophosphatase 3D structures]] | *[[Inositol monophosphatase 3D structures|Inositol monophosphatase 3D structures]] | ||
- | == References == | ||
- | <references/> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
[[Category: Large Structures]] | [[Category: Large Structures]] | ||
- | [[Category: Bhattacharyya | + | [[Category: Bhattacharyya S]] |
- | [[Category: Das | + | [[Category: Das AK]] |
- | [[Category: Dutta | + | [[Category: Dutta A]] |
- | [[Category: Dutta | + | [[Category: Dutta D]] |
- | + | ||
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Revision as of 10:52, 31 August 2022
Crystal structure of Staphylococcal IMPase-I complex with 3Mg2+ and Phosphate
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