1i7y

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 1: Line 1:
[[Image:1i7y.gif|left|200px]]
[[Image:1i7y.gif|left|200px]]
-
{{Structure
+
<!--
-
|PDB= 1i7y |SIZE=350|CAPTION= <scene name='initialview01'>1i7y</scene>, resolution 2.5&Aring;
+
The line below this paragraph, containing "STRUCTURE_1i7y", creates the "Structure Box" on the page.
-
|SITE=
+
You may change the PDB parameter (which sets the PDB file loaded into the applet)
-
|LIGAND= <scene name='pdbligand=CYC:PHYCOCYANOBILIN'>CYC</scene>, <scene name='pdbligand=MEN:N-METHYL+ASPARAGINE'>MEN</scene>
+
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
-
|ACTIVITY=
+
or leave the SCENE parameter empty for the default display.
-
|GENE=
+
-->
-
|DOMAIN=
+
{{STRUCTURE_1i7y| PDB=1i7y | SCENE= }}
-
|RELATEDENTRY=
+
-
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1i7y FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1i7y OCA], [http://www.ebi.ac.uk/pdbsum/1i7y PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1i7y RCSB]</span>
+
-
}}
+
'''CRYSTAL STRUCTURE OF C-PHYCOCYANIN OF SYNECHOCOCCUS VULCANUS AT 2.5 ANGSTROMS.'''
'''CRYSTAL STRUCTURE OF C-PHYCOCYANIN OF SYNECHOCOCCUS VULCANUS AT 2.5 ANGSTROMS.'''
Line 28: Line 25:
[[Category: Dobrovetsky, E.]]
[[Category: Dobrovetsky, E.]]
[[Category: Lerner, N.]]
[[Category: Lerner, N.]]
-
[[Category: cyanobacteria]]
+
[[Category: Cyanobacteria]]
-
[[Category: light harvesting protein]]
+
[[Category: Light harvesting protein]]
-
[[Category: photosynthesis]]
+
[[Category: Photosynthesis]]
-
[[Category: photosystem ii]]
+
[[Category: Photosystem ii]]
-
[[Category: thermostability]]
+
[[Category: Thermostability]]
-
 
+
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Fri May 2 19:41:11 2008''
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Mar 30 21:15:52 2008''
+

Revision as of 16:41, 2 May 2008

Template:STRUCTURE 1i7y

CRYSTAL STRUCTURE OF C-PHYCOCYANIN OF SYNECHOCOCCUS VULCANUS AT 2.5 ANGSTROMS.


Overview

The crystal structure of the light-harvesting phycobiliprotein, c-phycocyanin from the thermophilic cyanobacterium Synechochoccus vulcanus has been determined by molecular replacement to 2.5 A resolution. The crystal belongs to space group R32 with cell parameters a=b=188.43 A, c=61.28 A, alpha=beta=90 degrees, gamma=120 degrees, with one (alphabeta) monomer in the asymmetric unit. The structure has been refined to a crystallographic R factor of 20.2 % (R-free factor is 24.4 %), for all data to 2.5 A. The crystals were grown from phycocyanin (alphabeta)(3) trimers that form (alphabeta)(6) hexamers in the crystals, in a fashion similar to other phycocyanins. Comparison of the primary, tertiary and quaternary structures of the S. vulcanus phycocyanin structure with phycocyanins from both the mesophilic Fremyella diplsiphon and the thermophilic Mastigocladus laminosus were performed. We show that each level of assembly of oligomeric phycocyanin, which leads to the formation of the phycobilisome structure, can be stabilized in thermophilic organisms by amino acid residue substitutions. Each substitution can form additional ionic interactions at critical positions of each association interface. In addition, a significant shift in the position of ring D of the B155 phycocyanobilin cofactor in the S. vulcanus phycocyanin, enables the formation of important polar interactions at both the (alphabeta) monomer and (alphabeta)(6) hexamer association interfaces.

About this Structure

1I7Y is a Protein complex structure of sequences from Thermosynechococcus vulcanus. Full crystallographic information is available from OCA.

Reference

Structure of c-phycocyanin from the thermophilic cyanobacterium Synechococcus vulcanus at 2.5 A: structural implications for thermal stability in phycobilisome assembly., Adir N, Dobrovetsky Y, Lerner N, J Mol Biol. 2001 Oct 12;313(1):71-81. PMID:11601847 Page seeded by OCA on Fri May 2 19:41:11 2008

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools