7q6m
From Proteopedia
(Difference between revisions)
Line 1: | Line 1: | ||
==Structure of WrbA from Yersinia pseudotuberculosis in P1== | ==Structure of WrbA from Yersinia pseudotuberculosis in P1== | ||
- | <StructureSection load='7q6m' size='340' side='right'caption='[[7q6m]]' scene=''> | + | <StructureSection load='7q6m' size='340' side='right'caption='[[7q6m]], [[Resolution|resolution]] 2.04Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
- | <table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7Q6M OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7Q6M FirstGlance]. <br> | + | <table><tr><td colspan='2'>[[7q6m]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Yersinia_pseudotuberculosis Yersinia pseudotuberculosis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7Q6M OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7Q6M FirstGlance]. <br> |
- | </td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7q6m FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7q6m OCA], [https://pdbe.org/7q6m PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7q6m RCSB], [https://www.ebi.ac.uk/pdbsum/7q6m PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7q6m ProSAT]</span></td></tr> | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene></td></tr> |
+ | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7q6m FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7q6m OCA], [https://pdbe.org/7q6m PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7q6m RCSB], [https://www.ebi.ac.uk/pdbsum/7q6m PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7q6m ProSAT]</span></td></tr> | ||
</table> | </table> | ||
+ | == Function == | ||
+ | [[https://www.uniprot.org/uniprot/NQOR_YERPS NQOR_YERPS]] | ||
+ | <div style="background-color:#fffaf0;"> | ||
+ | == Publication Abstract from PubMed == | ||
+ | The enterohemorrhagic Escherichia coli pathotype is responsible for severe and dangerous infections in humans. Establishment of the infection requires colonization of the gastro-intestinal tract, which is dependent on the Type III Secretion System. The Type III Secretion System (T3SS) allows attachment of the pathogen to the mammalian host cell and cytoskeletal rearrangements within the host cell. Blocking the functionality of the T3SS is likely to reduce colonization and therefore limit the disease. This route offers an alternative to antibiotics, and problems with the development of antibiotics resistance. Salicylidene acylhydrazides have been shown to have an inhibitory effect on the T3SS in several pathogens. However, the main target of these compounds is still unclear. Past work has identified a number of putative protein targets of these compounds, one of which being WrbA. Whilst WrbA is considered an off-target interaction, this study presents the effect of the salicylidne acylhydrazide compounds on the activity of WrbA, along with crystal structures of WrbA from Yersinia pseudotuberculosis and Salmonella serovar Typhimurium; the latter also containing parts of the compound in the structure. We also present data showing that the original compounds were unstable in acidic conditions, and that later compounds showed improved stability. | ||
+ | |||
+ | Crystal structures of WrbA, a spurious target of the salicylidene acylhydrazide inhibitors of type III secretion in Gram-negative pathogens, and verification of improved specificity of next-generation compounds.,Zambelloni R, Beckham KSH, Wu HJ, Elofsson M, Marquez R, Gabrielsen M, Roe AJ Microbiology (Reading). 2022 Jul;168(7). doi: 10.1099/mic.0.001211. PMID:35829699<ref>PMID:35829699</ref> | ||
+ | |||
+ | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | ||
+ | </div> | ||
+ | <div class="pdbe-citations 7q6m" style="background-color:#fffaf0;"></div> | ||
+ | == References == | ||
+ | <references/> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
[[Category: Large Structures]] | [[Category: Large Structures]] | ||
+ | [[Category: Yersinia pseudotuberculosis]] | ||
[[Category: Beckham KSH]] | [[Category: Beckham KSH]] | ||
[[Category: Gabrielsen M]] | [[Category: Gabrielsen M]] | ||
[[Category: Roe AJ]] | [[Category: Roe AJ]] |
Revision as of 03:11, 8 September 2022
Structure of WrbA from Yersinia pseudotuberculosis in P1
|