7rhn
From Proteopedia
(Difference between revisions)
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==Co-crystal structure of Q67H mutant of disulfide stabilized HIV-1 CA hexamer and lenacapavir== | ==Co-crystal structure of Q67H mutant of disulfide stabilized HIV-1 CA hexamer and lenacapavir== | ||
| - | <StructureSection load='7rhn' size='340' side='right'caption='[[7rhn]]' scene=''> | + | <StructureSection load='7rhn' size='340' side='right'caption='[[7rhn]], [[Resolution|resolution]] 2.46Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7RHN OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7RHN FirstGlance]. <br> | + | <table><tr><td colspan='2'>[[7rhn]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Human_immunodeficiency_virus_1 Human immunodeficiency virus 1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7RHN OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7RHN FirstGlance]. <br> |
| - | </td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7rhn FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7rhn OCA], [https://pdbe.org/7rhn PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7rhn RCSB], [https://www.ebi.ac.uk/pdbsum/7rhn PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7rhn ProSAT]</span></td></tr> | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=IOD:IODIDE+ION'>IOD</scene>, <scene name='pdbligand=QNG:N-[(1S)-1-(3-{4-chloro-3-[(methylsulfonyl)amino]-1-(2,2,2-trifluoroethyl)-1H-indazol-7-yl}-6-[3-methyl-3-(methylsulfonyl)but-1-yn-1-yl]pyridin-2-yl)-2-(3,5-difluorophenyl)ethyl]-2-[(3bS,4aR)-5,5-difluoro-3-(trifluoromethyl)-3b,4,4a,5-tetrahydro-1H-cyclopropa[3,4]cyclopenta[1,2-c]pyrazol-1-yl]acetamide'>QNG</scene></td></tr> |
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7rhn FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7rhn OCA], [https://pdbe.org/7rhn PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7rhn RCSB], [https://www.ebi.ac.uk/pdbsum/7rhn PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7rhn ProSAT]</span></td></tr> | ||
</table> | </table> | ||
| + | == Function == | ||
| + | [[https://www.uniprot.org/uniprot/GAG_HV1N5 GAG_HV1N5]] Matrix protein p17 targets Gag and Gag-Pol polyproteins to the plasma membrane via a multipartite membrane binding signal, that includes its myristoylated N-terminus. Also mediates nuclear localization of the preintegration complex. Implicated in the release from host cell mediated by Vpu. Capsid protein p24 forms the conical core of the virus that encapsulates the genomic RNA-nucleocapsid complex. Nucleocapsid protein p7 encapsulates and protects viral dimeric unspliced (genomic) RNA. Binds these RNAs through its zinc fingers. p6-gag plays a role in budding of the assembled particle by interacting with the host class E VPS proteins TSG101 and PDCD6IP/AIP1 (By similarity). | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
| + | [[Category: Human immunodeficiency virus 1]] | ||
[[Category: Large Structures]] | [[Category: Large Structures]] | ||
[[Category: Bester SM]] | [[Category: Bester SM]] | ||
[[Category: Kvaratskhelia M]] | [[Category: Kvaratskhelia M]] | ||
Revision as of 04:13, 8 September 2022
Co-crystal structure of Q67H mutant of disulfide stabilized HIV-1 CA hexamer and lenacapavir
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