7vq6

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 1: Line 1:
==Structure of a specialized glyoxalase from Gossypium hirsutum==
==Structure of a specialized glyoxalase from Gossypium hirsutum==
-
<StructureSection load='7vq6' size='340' side='right'caption='[[7vq6]]' scene=''>
+
<StructureSection load='7vq6' size='340' side='right'caption='[[7vq6]], [[Resolution|resolution]] 1.39&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7VQ6 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7VQ6 FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[7vq6]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Gossypium_hirsutum Gossypium hirsutum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7VQ6 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7VQ6 FirstGlance]. <br>
-
</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7vq6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7vq6 OCA], [https://pdbe.org/7vq6 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7vq6 RCSB], [https://www.ebi.ac.uk/pdbsum/7vq6 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7vq6 ProSAT]</span></td></tr>
+
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=NI:NICKEL+(II)+ION'>NI</scene></td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7vq6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7vq6 OCA], [https://pdbe.org/7vq6 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7vq6 RCSB], [https://www.ebi.ac.uk/pdbsum/7vq6 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7vq6 ProSAT]</span></td></tr>
</table>
</table>
 +
== Function ==
 +
[[https://www.uniprot.org/uniprot/A0A1U8Q028_GOSHI A0A1U8Q028_GOSHI]] Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.[ARBA:ARBA00003610][RuleBase:RU361179]
 +
<div style="background-color:#fffaf0;">
 +
== Publication Abstract from PubMed ==
 +
Deoxynivalenol (DON) and its acetylated derivatives such as 3-acetyldeoxynivalenol (3A-DON) and 15-acetyldeoxynivalenol (15A-DON) are notorious mycotoxins in Fusarium contaminated cereals, which pose a great threat to human and livestock health. The specialized glyoxalase I from Gossypium hirsutum (SPG) can lower the toxicity of 3A-DON by conducting isomerization to transfer C8 carbonyl to C7 and double bond from C9-C10 to C8-C9. Here we report that the substrate-flexible SPG can also recognize 15A-DON and DON, probably following the same isomerization mechanism as that for 3A-DON. The crystallographic, mutagenesis, and biochemical analyses revealed that SPG provides a hydrophobic pocket to accommodate the substrate and residue E167 might serve as the catalytic base. A variant SPG(Y62A) that was constructed based on structure-based protein engineering exhibited elevated catalytic activity towards DON, 3A-DON, and 15A-DON by &gt;70%. Furthermore, variant SPG(Y62A) was successfully expressed in Pichia pastoris, whose catalytic activity was also compared to that produced in Escherichia coli. These results provide a blueprint for further protein engineering of SPG and reveal the potential applications of the enzyme in detoxifying DON, 3A-DON and 15A-DON.
 +
 +
Crystal structure and biochemical analysis of the specialized deoxynivalenol-detoxifying glyoxalase SPG from Gossypium hirsutum.,Hu Y, Li H, Min J, Yu Y, Liu W, Huang JW, Zhang L, Yang Y, Dai L, Chen CC, Guo RT Int J Biol Macromol. 2022 Mar 1;200:388-396. doi: 10.1016/j.ijbiomac.2022.01.055., Epub 2022 Jan 18. PMID:35051496<ref>PMID:35051496</ref>
 +
 +
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
 +
</div>
 +
<div class="pdbe-citations 7vq6" style="background-color:#fffaf0;"></div>
 +
== References ==
 +
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
 +
[[Category: Gossypium hirsutum]]
[[Category: Large Structures]]
[[Category: Large Structures]]
[[Category: Chen CC]]
[[Category: Chen CC]]

Revision as of 04:18, 8 September 2022

Structure of a specialized glyoxalase from Gossypium hirsutum

PDB ID 7vq6

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools