1iav
From Proteopedia
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[[Image:1iav.gif|left|200px]] | [[Image:1iav.gif|left|200px]] | ||
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| - | | | + | {{STRUCTURE_1iav| PDB=1iav | SCENE= }} |
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'''STRUCTURE ON NATIVE (ASN 87) SUBTILISIN FROM BACILLUS LENTUS''' | '''STRUCTURE ON NATIVE (ASN 87) SUBTILISIN FROM BACILLUS LENTUS''' | ||
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==About this Structure== | ==About this Structure== | ||
| - | 1IAV is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Bacillus_lentus Bacillus lentus]. This structure supersedes the now removed PDB entry | + | 1IAV is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Bacillus_lentus Bacillus lentus]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=1c13 1c13]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1IAV OCA]. |
==Reference== | ==Reference== | ||
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[[Category: Bott, R.]] | [[Category: Bott, R.]] | ||
[[Category: Knapp, M.]] | [[Category: Knapp, M.]] | ||
| - | [[Category: | + | [[Category: Altered flexibility]] |
| - | [[Category: | + | [[Category: Subtilisin]] |
| - | + | ''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Fri May 2 19:47:08 2008'' | |
| - | ''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on | + | |
Revision as of 16:47, 2 May 2008
STRUCTURE ON NATIVE (ASN 87) SUBTILISIN FROM BACILLUS LENTUS
Overview
The three-dimensional structures of engineered variants of Bacillus lentus subtilisin having increased enzymatic activity, K27R/N87S/V104Y/N123S/T274A (RSYSA) and N76D/N87S/S103A/V104I (DSAI), were determined by X-ray crystallography. In addition to identifying changes in atomic position we report a method that identifies protein segments having altered flexibility. The method utilizes a statistical analysis of variance to delineate main-chain temperature factors that represent significant departures from the overall variance between equivalent regions seen throughout the structure. This method reveals changes in main-chain mobility in both variants. Residues 125-127 have increased mobility in the RSYSA variant while residues 100-104 have decreased mobility in the DSAI variant. These segments are located at the substrate-binding site and changes in their mobility are believed to relate to the observed changes in proteolytic activity. The effect of altered crystal lattice contacts on segment flexibility becomes apparent when identical variants, determined in two crystal forms, are compared with the native enzyme.
About this Structure
1IAV is a Single protein structure of sequence from Bacillus lentus. This structure supersedes the now removed PDB entry 1c13. Full crystallographic information is available from OCA.
Reference
Engineered Bacillus lentus subtilisins having altered flexibility., Graycar T, Knapp M, Ganshaw G, Dauberman J, Bott R, J Mol Biol. 1999 Sep 10;292(1):97-109. PMID:10493860 Page seeded by OCA on Fri May 2 19:47:08 2008
