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7zgy
From Proteopedia
(Difference between revisions)
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==S-layer Deinoxanthin Binding Complex, C3 symmetry== | ==S-layer Deinoxanthin Binding Complex, C3 symmetry== | ||
| - | <StructureSection load='7zgy' size='340' side='right'caption='[[7zgy]]' scene=''> | + | <StructureSection load='7zgy' size='340' side='right'caption='[[7zgy]], [[Resolution|resolution]] 2.54Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7ZGY OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7ZGY FirstGlance]. <br> | + | <table><tr><td colspan='2'>[[7zgy]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Deinococcus_radiodurans_R1 Deinococcus radiodurans R1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7ZGY OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7ZGY FirstGlance]. <br> |
| - | </td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7zgy FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7zgy OCA], [https://pdbe.org/7zgy PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7zgy RCSB], [https://www.ebi.ac.uk/pdbsum/7zgy PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7zgy ProSAT]</span></td></tr> | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CU:COPPER+(II)+ION'>CU</scene>, <scene name='pdbligand=FE:FE+(III)+ION'>FE</scene>, <scene name='pdbligand=JPI:(3~{S},5~{R},6~{R})-5-[(3~{S},7~{R},12~{S},16~{S},20~{S})-3,7,12,16,20,24-hexamethyl-24-oxidanyl-pentacosyl]-4,4,6-trimethyl-cyclohexane-1,3-diol'>JPI</scene>, <scene name='pdbligand=JPX:[(2~{S})-3-[[(2~{S})-3-[(2~{S},3~{S},4~{S},5~{S},6~{S})-6-(hydroxymethyl)-4,5-bis(oxidanyl)-3-(propanoylamino)oxan-2-yl]oxy-1-oxidanylidene-1-(pentadecylamino)propan-2-yl]oxy-oxidanyl-phosphoryl]oxy-2-octanoyloxy-propyl]+decanoate'>JPX</scene>, <scene name='pdbligand=JQ6:[(2~{S})-2-acetyloxy-3-[[(2~{S})-3-[(2~{R},3~{S},4~{S},5~{S},6~{S})-6-(hydroxymethyl)-3-(octadecanoylamino)-4,5-bis(oxidanyl)oxan-2-yl]oxy-1-oxidanylidene-1-(pentylamino)propan-2-yl]oxy-oxidanyl-phosphoryl]oxy-propyl]+ethanoate'>JQ6</scene></td></tr> |
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7zgy FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7zgy OCA], [https://pdbe.org/7zgy PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7zgy RCSB], [https://www.ebi.ac.uk/pdbsum/7zgy PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7zgy ProSAT]</span></td></tr> | ||
</table> | </table> | ||
| + | == Function == | ||
| + | [[https://www.uniprot.org/uniprot/SLPA_DEIRA SLPA_DEIRA]] Major constituent of the S-layer. Plays an important role in the structural organization and integrity of the S-layer (PubMed:16946272, PubMed:26074883). Binds the carotenoid deinoxanthin, a strong protective antioxidant specific of this bacterium, and could be part of the first lane of defense against UV radiation, especially under desiccation (PubMed:26909071).<ref>PMID:16946272</ref> <ref>PMID:26074883</ref> <ref>PMID:26909071</ref> | ||
| + | == References == | ||
| + | <references/> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
| + | [[Category: Deinococcus radiodurans R1]] | ||
[[Category: Large Structures]] | [[Category: Large Structures]] | ||
[[Category: Farci D]] | [[Category: Farci D]] | ||
[[Category: Piano D]] | [[Category: Piano D]] | ||
Current revision
S-layer Deinoxanthin Binding Complex, C3 symmetry
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