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== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
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A specific DNA complex of the 65-residue, N-terminal fragment of the yeast transcriptional activator, GAL4, has been analysed at 2.7 A resolution by X-ray crystallography. The protein binds as a <scene name='92/925538/Dimer/2'>dimer</scene> to a symmetrical 17-base-pair sequence. There is a compact <scene name='92/925538/Metal_binding_domain/1'>metal binding domain</scene> (residues 8-40), an <scene name='92/925538/Extended_linker/2'>extended linker</scene> (41-49), and an <scene name='92/925538/Alpha-helical_dimerization/1'>alpha-helical dimerization element</scene> (50-64). A small, Zn(2+)-containing domain recognizes a conserved CCG triplet at each end of the site through direct contacts with the major groove. The binding domain contains <scene name='92/925538/Cysteine_metal_binding/1'>cysteine residues</scene> that coordinate to the metal as shown as cadmium. A short coiled-coil dimerization element imposes 2-fold symmetry. A segment of extended polypeptide chain links the metal-binding module to the dimerization element and specifies the length of the site. The relatively open structure of the complex would allow another protein to bind coordinately with GAL4.
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A specific DNA complex of the 65-residue, N-terminal fragment of the yeast transcriptional activator, GAL4, has been analysed at 2.7 A resolution by X-ray crystallography. The protein binds as a <scene name='92/925538/Dimer/2'>dimer</scene> to a symmetrical 17-base-pair sequence. There is a compact <scene name='92/925538/Metal_binding_domain/1'>metal binding domain</scene> (residues 8-40), an <scene name='92/925538/Extended_linker/2'>extended linker</scene> (41-49), and an <scene name='92/925538/Alpha-helical_dimerization/1'>alpha-helical dimerization element</scene> (50-64). A small, Zn(2+)-containing domain recognizes a conserved CCG triplet at each end of the site through direct contacts with the major groove. The metal binding domain contains <scene name='92/925538/Cysteine_metal_binding/1'>cysteine residues</scene> that coordinate to the metal as shown as cadmium. A short coiled-coil dimerization element imposes 2-fold symmetry. A segment of extended polypeptide chain links the metal-binding module to the dimerization element and specifies the length of the site. The relatively open structure of the complex would allow another protein to bind coordinately with GAL4.
DNA recognition by GAL4: structure of a protein-DNA complex.,Marmorstein R, Carey M, Ptashne M, Harrison SC Nature. 1992 Apr 2;356(6368):408-14. PMID:1557122<ref>PMID:1557122</ref>
DNA recognition by GAL4: structure of a protein-DNA complex.,Marmorstein R, Carey M, Ptashne M, Harrison SC Nature. 1992 Apr 2;356(6368):408-14. PMID:1557122<ref>PMID:1557122</ref>

Revision as of 20:56, 19 September 2022

DNA RECOGNITION BY GAL4: STRUCTURE OF A PROTEIN/DNA COMPLEX

PDB ID 1d66

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