4diq
From Proteopedia
(Difference between revisions)
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==Crystal Structure of human NO66== | ==Crystal Structure of human NO66== | ||
- | <StructureSection load='4diq' size='340' side='right' caption='[[4diq]], [[Resolution|resolution]] 2.40Å' scene=''> | + | <StructureSection load='4diq' size='340' side='right'caption='[[4diq]], [[Resolution|resolution]] 2.40Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
- | <table><tr><td colspan='2'>[[4diq]] is a 2 chain structure with sequence from [ | + | <table><tr><td colspan='2'>[[4diq]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4DIQ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4DIQ FirstGlance]. <br> |
- | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=NI:NICKEL+(II)+ION'>NI</scene>, <scene name='pdbligand=PD2:PYRIDINE-2,4-DICARBOXYLIC+ACID'>PD2</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=NI:NICKEL+(II)+ION'>NI</scene>, <scene name='pdbligand=PD2:PYRIDINE-2,4-DICARBOXYLIC+ACID'>PD2</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr> |
- | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4diq FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4diq OCA], [https://pdbe.org/4diq PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4diq RCSB], [https://www.ebi.ac.uk/pdbsum/4diq PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4diq ProSAT]</span></td></tr> | |
- | + | ||
- | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | |
</table> | </table> | ||
== Function == | == Function == | ||
- | [[ | + | [[https://www.uniprot.org/uniprot/RIOX1_HUMAN RIOX1_HUMAN]] Oxygenase that can act as both a histone lysine demethylase and a ribosomal histidine hydroxylase. Specifically demethylates 'Lys-4' (H3K4me) and 'Lys-36' (H3K36me) of histone H3, thereby playing a central role in histone code. Preferentially demethylates trimethylated H3 'Lys-4' (H3K4me3) and monomethylated H3 'Lys-4' (H3K4me1) residues, while it has weaker activity for dimethylated H3 'Lys-36' (H3K36me2). Also catalyzes the hydroxylation of 60S ribosomal protein L8 on 'His-216'. Acts as a regulator of osteoblast differentiation via its interaction with SP7/OSX by demethylating H3K4me and H3K36me, thereby inhibiting SP7/OSX-mediated promoter activation (By similarity). May also play a role in ribosome biogenesis and in the replication or remodeling of certain heterochromatic region. Participates in MYC-induced transcriptional activation.<ref>PMID:14742713</ref> <ref>PMID:17308053</ref> <ref>PMID:23103944</ref> |
== References == | == References == | ||
<references/> | <references/> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
- | [[Category: | + | [[Category: Homo sapiens]] |
- | [[Category: | + | [[Category: Large Structures]] |
- | [[Category: | + | [[Category: Arrowsmith CH]] |
- | [[Category: | + | [[Category: Bountra C]] |
- | [[Category: | + | [[Category: Bray J]] |
- | [[Category: Edwards | + | [[Category: Edwards E]] |
- | [[Category: Filippakopoulos | + | [[Category: Filippakopoulos P]] |
- | [[Category: Krojer | + | [[Category: Krojer T]] |
- | [[Category: Ng | + | [[Category: Ng S]] |
- | [[Category: Oppermann | + | [[Category: Oppermann U]] |
- | [[Category: Pike | + | [[Category: Pike ACW]] |
- | [[Category: Pilka | + | [[Category: Pilka E]] |
- | [[Category: Roos | + | [[Category: Roos A]] |
- | + | [[Category: Vollmar M]] | |
- | [[Category: Vollmar | + | [[Category: Von Delft F]] |
- | [[Category: | + | |
- | + | ||
- | + |
Revision as of 08:20, 21 September 2022
Crystal Structure of human NO66
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Categories: Homo sapiens | Large Structures | Arrowsmith CH | Bountra C | Bray J | Edwards E | Filippakopoulos P | Krojer T | Ng S | Oppermann U | Pike ACW | Pilka E | Roos A | Vollmar M | Von Delft F