This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


4e2k

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 1: Line 1:
==The structure of the S. aureus DnaG RNA Polymerase Domain==
==The structure of the S. aureus DnaG RNA Polymerase Domain==
-
<StructureSection load='4e2k' size='340' side='right' caption='[[4e2k]], [[Resolution|resolution]] 2.15&Aring;' scene=''>
+
<StructureSection load='4e2k' size='340' side='right'caption='[[4e2k]], [[Resolution|resolution]] 2.15&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[4e2k]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/"micrococcus_aureus"_(rosenbach_1884)_zopf_1885 "micrococcus aureus" (rosenbach 1884) zopf 1885]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4E2K OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4E2K FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[4e2k]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Staphylococcus_aureus Staphylococcus aureus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4E2K OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4E2K FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=BEN:BENZAMIDINE'>BEN</scene></td></tr>
+
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BEN:BENZAMIDINE'>BEN</scene></td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">dnaG ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1280 "Micrococcus aureus" (Rosenbach 1884) Zopf 1885])</td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4e2k FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4e2k OCA], [https://pdbe.org/4e2k PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4e2k RCSB], [https://www.ebi.ac.uk/pdbsum/4e2k PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4e2k ProSAT]</span></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4e2k FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4e2k OCA], [http://pdbe.org/4e2k PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4e2k RCSB], [http://www.ebi.ac.uk/pdbsum/4e2k PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4e2k ProSAT]</span></td></tr>
+
</table>
</table>
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/PRIM_STAAU PRIM_STAAU]] DNA primase is the polymerase that synthesizes small RNA primers for the Okazaki fragments on both template strands at replication forks during chromosomal DNA synthesis.
+
[[https://www.uniprot.org/uniprot/DNAG_STAAU DNAG_STAAU]] RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication.[HAMAP-Rule:MF_00974]
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 21: Line 20:
==See Also==
==See Also==
-
*[[RNA polymerase|RNA polymerase]]
+
*[[RNA polymerase 3D structures|RNA polymerase 3D structures]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Berger, J M]]
+
[[Category: Large Structures]]
-
[[Category: Clement, C]]
+
[[Category: Staphylococcus aureus]]
-
[[Category: Corn, J E]]
+
[[Category: Berger JM]]
-
[[Category: Rymer, R U]]
+
[[Category: Clement C]]
-
[[Category: Solorio, F A]]
+
[[Category: Corn JE]]
-
[[Category: Wang, J D]]
+
[[Category: Rymer RU]]
-
[[Category: Apo protein]]
+
[[Category: Solorio FA]]
-
[[Category: Bacterial]]
+
[[Category: Wang JD]]
-
[[Category: Catalytic domain]]
+
-
[[Category: Transferase]]
+

Revision as of 06:46, 28 September 2022

The structure of the S. aureus DnaG RNA Polymerase Domain

PDB ID 4e2k

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/4e2k"
Personal tools