7pm4

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==Cryo-EM structures of human fucosidase FucA1 reveal insight into substate recognition and catalysis.==
==Cryo-EM structures of human fucosidase FucA1 reveal insight into substate recognition and catalysis.==
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<StructureSection load='7pm4' size='340' side='right'caption='[[7pm4]]' scene=''>
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<StructureSection load='7pm4' size='340' side='right'caption='[[7pm4]], [[Resolution|resolution]] 2.49&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7PM4 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7PM4 FirstGlance]. <br>
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<table><tr><td colspan='2'>[[7pm4]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7PM4 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7PM4 FirstGlance]. <br>
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</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7pm4 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7pm4 OCA], [https://pdbe.org/7pm4 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7pm4 RCSB], [https://www.ebi.ac.uk/pdbsum/7pm4 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7pm4 ProSAT]</span></td></tr>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=DFU:(2S,3R,4S,5R)-2-METHYLPIPERIDINE-3,4,5-TRIOL'>DFU</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7pm4 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7pm4 OCA], [https://pdbe.org/7pm4 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7pm4 RCSB], [https://www.ebi.ac.uk/pdbsum/7pm4 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7pm4 ProSAT]</span></td></tr>
</table>
</table>
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== Disease ==
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[https://www.uniprot.org/uniprot/FUCO_HUMAN FUCO_HUMAN] Fucosidosis. The disease is caused by variants affecting the gene represented in this entry.
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== Function ==
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[https://www.uniprot.org/uniprot/FUCO_HUMAN FUCO_HUMAN] Alpha-L-fucosidase is responsible for hydrolyzing the alpha-1,6-linked fucose joined to the reducing-end N-acetylglucosamine of the carbohydrate moieties of glycoproteins.<ref>PMID:9741689</ref>
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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Enzymatic hydrolysis of alpha-L-fucose from fucosylated glycoconjugates is consequential in bacterial infections and the neurodegenerative lysosomal storage disorder fucosidosis. Understanding human alpha-L-fucosidase catalysis, in an effort toward drug design, has been hindered by the absence of three-dimensional structural data for any animal fucosidase. Here, we have used cryoelectron microscopy (cryo-EM) to determine the structure of human lysosomal alpha-L-fucosidase (FucA1) in both an unliganded state and in complex with the inhibitor deoxyfuconojirimycin. These structures, determined at 2.49 A resolution, reveal the homotetrameric structure of FucA1, the architecture of the catalytic center, and the location of both natural population variations and disease-causing mutations. Furthermore, this work has conclusively identified the hitherto contentious identity of the catalytic acid/base as aspartate-276, representing a shift from both the canonical glutamate acid/base residue and a previously proposed glutamate residue. These findings have furthered our understanding of how FucA1 functions in both health and disease.
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Cryo-EM structures of human fucosidase FucA1 reveal insight into substrate recognition and catalysis.,Armstrong Z, Meek RW, Wu L, Blaza JN, Davies GJ Structure. 2022 Jul 19. pii: S0969-2126(22)00270-2. doi:, 10.1016/j.str.2022.07.001. PMID:35907402<ref>PMID:35907402</ref>
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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</div>
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<div class="pdbe-citations 7pm4" style="background-color:#fffaf0;"></div>
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== References ==
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<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Homo sapiens]]
[[Category: Large Structures]]
[[Category: Large Structures]]
[[Category: Armstrong Z]]
[[Category: Armstrong Z]]

Revision as of 19:31, 19 October 2022

Cryo-EM structures of human fucosidase FucA1 reveal insight into substate recognition and catalysis.

PDB ID 7pm4

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