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| ==Crystal Structure of Epiphyas postvittana Takeout 1 expressed in Sf9 cells== | | ==Crystal Structure of Epiphyas postvittana Takeout 1 expressed in Sf9 cells== |
- | <StructureSection load='4g0s' size='340' side='right' caption='[[4g0s]], [[Resolution|resolution]] 2.19Å' scene=''> | + | <StructureSection load='4g0s' size='340' side='right'caption='[[4g0s]], [[Resolution|resolution]] 2.19Å' scene=''> |
| == Structural highlights == | | == Structural highlights == |
- | <table><tr><td colspan='2'>[[4g0s]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Epipo Epipo]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4G0S OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4G0S FirstGlance]. <br> | + | <table><tr><td colspan='2'>[[4g0s]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Epiphyas_postvittana Epiphyas postvittana]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4G0S OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4G0S FirstGlance]. <br> |
- | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=MYR:MYRISTIC+ACID'>MYR</scene></td></tr> | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MYR:MYRISTIC+ACID'>MYR</scene></td></tr> |
- | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[3e8t|3e8t]], [[3e8w|3e8w]]</td></tr>
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4g0s FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4g0s OCA], [https://pdbe.org/4g0s PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4g0s RCSB], [https://www.ebi.ac.uk/pdbsum/4g0s PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4g0s ProSAT]</span></td></tr> |
- | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">takeout 1 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=65032 EPIPO])</td></tr>
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- | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4g0s FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4g0s OCA], [http://pdbe.org/4g0s PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4g0s RCSB], [http://www.ebi.ac.uk/pdbsum/4g0s PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4g0s ProSAT]</span></td></tr> | + | |
| </table> | | </table> |
| + | == Function == |
| + | [https://www.uniprot.org/uniprot/B5ABT1_EPIPO B5ABT1_EPIPO] |
| <div style="background-color:#fffaf0;"> | | <div style="background-color:#fffaf0;"> |
| == Publication Abstract from PubMed == | | == Publication Abstract from PubMed == |
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| __TOC__ | | __TOC__ |
| </StructureSection> | | </StructureSection> |
- | [[Category: Epipo]] | + | [[Category: Epiphyas postvittana]] |
- | [[Category: Baker, E N]] | + | [[Category: Large Structures]] |
- | [[Category: Hamiaux, C]] | + | [[Category: Baker EN]] |
- | [[Category: Newcomb, R D]] | + | [[Category: Hamiaux C]] |
- | [[Category: Transport protein]] | + | [[Category: Newcomb RD]] |
| Structural highlights
Function
B5ABT1_EPIPO
Publication Abstract from PubMed
Takeout proteins are found across a diverse range of insect species and are thought to be involved in important aspects of insect physiology and behavior. These proteins act as ligand carriers, but the nature of their endogenous ligands remains unknown. The crystal structure of Epiphyas postvittana Takeout 1 (EpTo1), the only structure for any Takeout protein to date, revealed an alpha/beta-wrap fold with a purely hydrophobic internal cavity of tubular shape. When recombinantly expressed in Escherichia coli, we previously showed that a surrogate ubiquinone-8 ligand binds within the internal cavity of EpTo1 with excellent shape complementarity. We have now expressed EpTo1 in an insect cell expression system devoid of ubiquinone-8, and solved its crystal structure at 2.2A resolution. Using combined information from crystallography and mass spectrometry, we identify a mixture of fatty acid moieties, mostly myristic and palmitic acid, bound inside the EpTo1 cavity, mimicking the structure of the longer ubiquinone-8 compound. No significant alteration of the internal cavity was observed regardless of the bound ligands, ubiquinone-8 or fatty acids, suggesting that the internal cavity of EpTo1 forms a rigid scaffold that imposes strict structural constraints for selectivity and specificity of ligand(s) in vivo.
Ligand promiscuity within the internal cavity of Epiphyas postvittana Takeout 1 protein.,Hamiaux C, Basten L, Greenwood DR, Baker EN, Newcomb RD J Struct Biol. 2013 Apr 4. pii: S1047-8477(13)00084-1. doi:, 10.1016/j.jsb.2013.03.013. PMID:23563188[1]
From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.
References
- ↑ Hamiaux C, Basten L, Greenwood DR, Baker EN, Newcomb RD. Ligand promiscuity within the internal cavity of Epiphyas postvittana Takeout 1 protein. J Struct Biol. 2013 Apr 4. pii: S1047-8477(13)00084-1. doi:, 10.1016/j.jsb.2013.03.013. PMID:23563188 doi:10.1016/j.jsb.2013.03.013
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