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| | ==Structure of cytoplasmic domain of TCPE from Vibrio cholerae== | | ==Structure of cytoplasmic domain of TCPE from Vibrio cholerae== |
| - | <StructureSection load='4hhx' size='340' side='right' caption='[[4hhx]], [[Resolution|resolution]] 1.88Å' scene=''> | + | <StructureSection load='4hhx' size='340' side='right'caption='[[4hhx]], [[Resolution|resolution]] 1.88Å' scene=''> |
| | == Structural highlights == | | == Structural highlights == |
| - | <table><tr><td colspan='2'>[[4hhx]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Vibch Vibch]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4HHX OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4HHX FirstGlance]. <br> | + | <table><tr><td colspan='2'>[[4hhx]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Vibrio_cholerae_O1_biovar_El_Tor_str._N16961 Vibrio cholerae O1 biovar El Tor str. N16961]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4HHX OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4HHX FirstGlance]. <br> |
| - | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr> | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr> |
| - | <tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4hhx FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4hhx OCA], [https://pdbe.org/4hhx PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4hhx RCSB], [https://www.ebi.ac.uk/pdbsum/4hhx PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4hhx ProSAT]</span></td></tr> |
| - | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[4hji|4hji]]</td></tr>
| + | |
| - | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">tcpE, VC_0836 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=243277 VIBCH])</td></tr>
| + | |
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4hhx FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4hhx OCA], [http://pdbe.org/4hhx PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4hhx RCSB], [http://www.ebi.ac.uk/pdbsum/4hhx PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4hhx ProSAT]</span></td></tr> | + | |
| | </table> | | </table> |
| | == Function == | | == Function == |
| - | [[http://www.uniprot.org/uniprot/TCPE_VIBCH TCPE_VIBCH]] Probably involved in cholera toxin receptor (GM1) interaction in order to bring the cells within close proximity of the ganglioside for efficient toxin delivery. | + | [https://www.uniprot.org/uniprot/TCPE_VIBCH TCPE_VIBCH] Probably involved in cholera toxin receptor (GM1) interaction in order to bring the cells within close proximity of the ganglioside for efficient toxin delivery. |
| | <div style="background-color:#fffaf0;"> | | <div style="background-color:#fffaf0;"> |
| | == Publication Abstract from PubMed == | | == Publication Abstract from PubMed == |
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| | __TOC__ | | __TOC__ |
| | </StructureSection> | | </StructureSection> |
| - | [[Category: Vibch]] | + | [[Category: Large Structures]] |
| - | [[Category: Craig, L]] | + | [[Category: Vibrio cholerae O1 biovar El Tor str. N16961]] |
| - | [[Category: Kolappan, S]] | + | [[Category: Craig L]] |
| - | [[Category: Gspf superfamily]] | + | [[Category: Kolappan S]] |
| - | [[Category: Inner membrane platform]]
| + | |
| - | [[Category: Integral inner membrane protein]]
| + | |
| - | [[Category: Membrane protein]]
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| - | [[Category: N-terminal cytoplasmic domain]]
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| - | [[Category: Polytopic membrane protein]]
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| - | [[Category: Type iv pilus assembly protein]]
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| Structural highlights
Function
TCPE_VIBCH Probably involved in cholera toxin receptor (GM1) interaction in order to bring the cells within close proximity of the ganglioside for efficient toxin delivery.
Publication Abstract from PubMed
Type IV pili are long thin surface-displayed polymers of the pilin subunit that are present in a diverse group of bacteria. These multifunctional filaments are critical to virulence for pathogens such as Vibrio cholerae, which use them to form microcolonies and to secrete the colonization factor TcpF. The type IV pili are assembled from pilin subunits by a complex inner membrane machinery. The core component of the type IV pilus-assembly platform is an integral inner membrane protein belonging to the GspF superfamily of secretion proteins. These proteins somehow convert chemical energy from ATP hydrolysis by an assembly ATPase on the cytoplasmic side of the inner membrane to mechanical energy for extrusion of the growing pilus filament out of the inner membrane. Most GspF-family inner membrane core proteins are predicted to have N-terminal and central cytoplasmic domains, cyto1 and cyto2, and three transmembrane segments, TM1, TM2 and TM3. Cyto2 and TM3 represent an internal repeat of cyto1 and TM1. Here, the 1.88 A resolution crystal structure of the cyto1 domain of V. cholerae TcpE, which is required for assembly of the toxin-coregulated pilus, is reported. This domain folds as a monomeric six-helix bundle with a positively charged membrane-interaction face at one end and a hydrophobic groove at the other end that may serve as a binding site for partner proteins in the pilus-assembly complex.
Structure of the cytoplasmic domain of TcpE, the inner membrane core protein required for assembly of the Vibrio cholerae toxin-coregulated pilus.,Kolappan S, Craig L Acta Crystallogr D Biol Crystallogr. 2013 Apr;69(Pt 4):513-9. doi:, 10.1107/S0907444912050330. Epub 2013 Mar 9. PMID:23519659[1]
From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.
References
- ↑ Kolappan S, Craig L. Structure of the cytoplasmic domain of TcpE, the inner membrane core protein required for assembly of the Vibrio cholerae toxin-coregulated pilus. Acta Crystallogr D Biol Crystallogr. 2013 Apr;69(Pt 4):513-9. doi:, 10.1107/S0907444912050330. Epub 2013 Mar 9. PMID:23519659 doi:http://dx.doi.org/10.1107/S0907444912050330
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