This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


4hx9

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 1: Line 1:
==Designed Phosphodeoxyribosyltransferase==
==Designed Phosphodeoxyribosyltransferase==
-
<StructureSection load='4hx9' size='340' side='right' caption='[[4hx9]], [[Resolution|resolution]] 2.68&Aring;' scene=''>
+
<StructureSection load='4hx9' size='340' side='right'caption='[[4hx9]], [[Resolution|resolution]] 2.68&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[4hx9]] is a 8 chain structure with sequence from [http://en.wikipedia.org/wiki/"bacillus_leichmanni_i"_(sic)_henneberg_1903 "bacillus leichmanni i" (sic) henneberg 1903]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4HX9 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4HX9 FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[4hx9]] is a 8 chain structure with sequence from [https://en.wikipedia.org/wiki/Lactobacillus_leichmannii Lactobacillus leichmannii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4HX9 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4HX9 FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=PG4:TETRAETHYLENE+GLYCOL'>PG4</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
+
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=PG4:TETRAETHYLENE+GLYCOL'>PG4</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">ntd ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=28039 "Bacillus Leichmanni I" (sic) Henneberg 1903])</td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4hx9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4hx9 OCA], [https://pdbe.org/4hx9 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4hx9 RCSB], [https://www.ebi.ac.uk/pdbsum/4hx9 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4hx9 ProSAT]</span></td></tr>
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Nucleoside_deoxyribosyltransferase Nucleoside deoxyribosyltransferase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.4.2.6 2.4.2.6] </span></td></tr>
+
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4hx9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4hx9 OCA], [http://pdbe.org/4hx9 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4hx9 RCSB], [http://www.ebi.ac.uk/pdbsum/4hx9 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4hx9 ProSAT]</span></td></tr>
+
</table>
</table>
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/NTD_LACLE NTD_LACLE]] Catalyzes the cleavage of the glycosidic bond of 2'-deoxyribonucleosides and the transfer of the deoxyribosyl moiety to an acceptor purine or pyrimidine base.<ref>PMID:7797550</ref> <ref>PMID:8805514</ref>
+
[https://www.uniprot.org/uniprot/NTD_LACLE NTD_LACLE] Catalyzes the cleavage of the glycosidic bond of 2'-deoxyribonucleosides and the transfer of the deoxyribosyl moiety to an acceptor purine or pyrimidine base.<ref>PMID:7797550</ref> <ref>PMID:8805514</ref>
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 24: Line 22:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Nucleoside deoxyribosyltransferase]]
+
[[Category: Lactobacillus leichmannii]]
-
[[Category: Kaminski, P A]]
+
[[Category: Large Structures]]
-
[[Category: Labesse, G]]
+
[[Category: Kaminski PA]]
-
[[Category: Non natural and design enzyme]]
+
[[Category: Labesse G]]
-
[[Category: Phosphodeoxyribosyltransferase]]
+
-
[[Category: Rossmann fold]]
+
-
[[Category: Transferase]]
+

Revision as of 08:23, 9 November 2022

Designed Phosphodeoxyribosyltransferase

PDB ID 4hx9

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/4hx9"
Personal tools