4ii1

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==Crystal structure of the zinc finger of ZGPAT==
==Crystal structure of the zinc finger of ZGPAT==
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<StructureSection load='4ii1' size='340' side='right' caption='[[4ii1]], [[Resolution|resolution]] 2.65&Aring;' scene=''>
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<StructureSection load='4ii1' size='340' side='right'caption='[[4ii1]], [[Resolution|resolution]] 2.65&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[4ii1]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Human Human]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4II1 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4II1 FirstGlance]. <br>
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<table><tr><td colspan='2'>[[4ii1]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4II1 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4II1 FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=UNX:UNKNOWN+ATOM+OR+ION'>UNX</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=UNX:UNKNOWN+ATOM+OR+ION'>UNX</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">ZGPAT, GPATC6, GPATCH6, KIAA1847, ZC3H9, ZC3HDC9, ZIP ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 HUMAN])</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4ii1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4ii1 OCA], [https://pdbe.org/4ii1 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4ii1 RCSB], [https://www.ebi.ac.uk/pdbsum/4ii1 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4ii1 ProSAT]</span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4ii1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4ii1 OCA], [http://pdbe.org/4ii1 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4ii1 RCSB], [http://www.ebi.ac.uk/pdbsum/4ii1 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4ii1 ProSAT]</span></td></tr>
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</table>
</table>
== Function ==
== Function ==
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[[http://www.uniprot.org/uniprot/ZGPAT_HUMAN ZGPAT_HUMAN]] Transcription repressor that specifically binds the 5'-GGAG[GA]A[GA]A-3' consensus sequence. Represses transcription by recruiting the chromatin multiprotein complex NuRD to target promoters. Negatively regulates expression of EGFR, a gene involved in cell proliferation, survival and migration. Its ability to repress genes of the EGFR pathway suggest it may act as a tumor suppressor. Able to suppress breast carcinogenesis.<ref>PMID:19644445</ref> Isoform 4: Antagonizes the transcription repression by isoform 1 by competing for the binding of the NuRD complex. Does not bind DNA.<ref>PMID:19644445</ref>
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[https://www.uniprot.org/uniprot/ZGPAT_HUMAN ZGPAT_HUMAN] Transcription repressor that specifically binds the 5'-GGAG[GA]A[GA]A-3' consensus sequence. Represses transcription by recruiting the chromatin multiprotein complex NuRD to target promoters. Negatively regulates expression of EGFR, a gene involved in cell proliferation, survival and migration. Its ability to repress genes of the EGFR pathway suggest it may act as a tumor suppressor. Able to suppress breast carcinogenesis.<ref>PMID:19644445</ref> Isoform 4: Antagonizes the transcription repression by isoform 1 by competing for the binding of the NuRD complex. Does not bind DNA.<ref>PMID:19644445</ref>
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Human]]
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[[Category: Homo sapiens]]
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[[Category: Arrowsmith, C H]]
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[[Category: Large Structures]]
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[[Category: Bian, C]]
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[[Category: Arrowsmith CH]]
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[[Category: Bountra, C]]
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[[Category: Bian C]]
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[[Category: Chao, X]]
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[[Category: Bountra C]]
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[[Category: Dong, A]]
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[[Category: Chao X]]
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[[Category: Edwards, A M]]
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[[Category: Dong A]]
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[[Category: Fu, M]]
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[[Category: Edwards AM]]
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[[Category: Min, J]]
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[[Category: Fu M]]
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[[Category: Structural genomic]]
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[[Category: Min J]]
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[[Category: Tempel, W]]
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[[Category: Tempel W]]
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[[Category: Weigelt, J]]
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[[Category: Weigelt J]]
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[[Category: Wernimont, A K]]
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[[Category: Wernimont AK]]
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[[Category: Sgc]]
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[[Category: Transcription]]
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[[Category: Transcription regulation]]
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Revision as of 20:46, 16 November 2022

Crystal structure of the zinc finger of ZGPAT

PDB ID 4ii1

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