This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


4it5

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (21:09, 16 November 2022) (edit) (undo)
 
Line 1: Line 1:
==Chaperone HscB from Vibrio cholerae==
==Chaperone HscB from Vibrio cholerae==
-
<StructureSection load='4it5' size='340' side='right' caption='[[4it5]], [[Resolution|resolution]] 2.15&Aring;' scene=''>
+
<StructureSection load='4it5' size='340' side='right'caption='[[4it5]], [[Resolution|resolution]] 2.15&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[4it5]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/"bacillo_virgola_del_koch"_trevisan_1884 "bacillo virgola del koch" trevisan 1884]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=3hho 3hho]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4IT5 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4IT5 FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[4it5]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Vibrio_cholerae Vibrio cholerae]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=3hho 3hho]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4IT5 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4IT5 FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene></td></tr>
+
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4it5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4it5 OCA], [https://pdbe.org/4it5 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4it5 RCSB], [https://www.ebi.ac.uk/pdbsum/4it5 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4it5 ProSAT]</span></td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">hscB, VC_0751 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=666 "Bacillo virgola del Koch" Trevisan 1884])</td></tr>
+
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4it5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4it5 OCA], [http://pdbe.org/4it5 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4it5 RCSB], [http://www.ebi.ac.uk/pdbsum/4it5 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4it5 ProSAT]</span></td></tr>
+
</table>
</table>
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/HSCB_VIBCH HSCB_VIBCH]] Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA.[HAMAP-Rule:MF_00682]
+
[https://www.uniprot.org/uniprot/HSCB_VIBCH HSCB_VIBCH] Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA.[HAMAP-Rule:MF_00682]
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Bacillo virgola del koch trevisan 1884]]
+
[[Category: Large Structures]]
-
[[Category: Anderson, W F]]
+
[[Category: Vibrio cholerae]]
-
[[Category: Structural genomic]]
+
[[Category: Anderson WF]]
-
[[Category: Gu, M]]
+
[[Category: Gu M]]
-
[[Category: Joachimiak, A]]
+
[[Category: Joachimiak A]]
-
[[Category: Osipiuk, J]]
+
[[Category: Osipiuk J]]
-
[[Category: Papazisi, L]]
+
[[Category: Papazisi L]]
-
[[Category: Chaperone]]
+
-
[[Category: Csgid]]
+
-
[[Category: Hsc20]]
+
-
[[Category: Hscb]]
+
-
[[Category: National institute of allergy and infectious disease]]
+
-
[[Category: Niaid]]
+

Current revision

Chaperone HscB from Vibrio cholerae

PDB ID 4it5

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools