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| | ==Structure of a novel telomere repeat binding protein bound to DNA== | | ==Structure of a novel telomere repeat binding protein bound to DNA== |
| - | <StructureSection load='4j19' size='340' side='right' caption='[[4j19]], [[Resolution|resolution]] 2.90Å' scene=''> | + | <StructureSection load='4j19' size='340' side='right'caption='[[4j19]], [[Resolution|resolution]] 2.90Å' scene=''> |
| | == Structural highlights == | | == Structural highlights == |
| - | <table><tr><td colspan='2'>[[4j19]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Human Human]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4J19 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4J19 FirstGlance]. <br> | + | <table><tr><td colspan='2'>[[4j19]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4J19 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4J19 FirstGlance]. <br> |
| - | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene></td></tr> | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene></td></tr> |
| - | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">HMBOX1 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 HUMAN])</td></tr>
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4j19 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4j19 OCA], [https://pdbe.org/4j19 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4j19 RCSB], [https://www.ebi.ac.uk/pdbsum/4j19 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4j19 ProSAT]</span></td></tr> |
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4j19 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4j19 OCA], [http://pdbe.org/4j19 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4j19 RCSB], [http://www.ebi.ac.uk/pdbsum/4j19 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4j19 ProSAT]</span></td></tr> | + | |
| | </table> | | </table> |
| | == Function == | | == Function == |
| - | [[http://www.uniprot.org/uniprot/HMBX1_HUMAN HMBX1_HUMAN]] Transcription factor. Isoform 1 acts as a transcriptional repressor. Isoform 4 has very low activity as a transcriptional repressor.<ref>PMID:16825764</ref> <ref>PMID:19757162</ref> | + | [https://www.uniprot.org/uniprot/HMBX1_HUMAN HMBX1_HUMAN] Transcription factor. Isoform 1 acts as a transcriptional repressor. Isoform 4 has very low activity as a transcriptional repressor.<ref>PMID:16825764</ref> <ref>PMID:19757162</ref> |
| | <div style="background-color:#fffaf0;"> | | <div style="background-color:#fffaf0;"> |
| | == Publication Abstract from PubMed == | | == Publication Abstract from PubMed == |
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| | __TOC__ | | __TOC__ |
| | </StructureSection> | | </StructureSection> |
| - | [[Category: Human]] | + | [[Category: Homo sapiens]] |
| - | [[Category: Basquin, C]] | + | [[Category: Large Structures]] |
| - | [[Category: Benda, C]] | + | [[Category: Basquin C]] |
| - | [[Category: Buchholz, F]] | + | [[Category: Benda C]] |
| - | [[Category: Butter, F]] | + | [[Category: Buchholz F]] |
| - | [[Category: Draskovic, I]] | + | [[Category: Butter F]] |
| - | [[Category: Jessberger, R]] | + | [[Category: Draskovic I]] |
| - | [[Category: Kappei, D]] | + | [[Category: Jessberger R]] |
| - | [[Category: Kittler, R]] | + | [[Category: Kappei D]] |
| - | [[Category: Krastev, D B]] | + | [[Category: Kittler R]] |
| - | [[Category: Londono-Vallejo, A J]] | + | [[Category: Krastev DB]] |
| - | [[Category: Mann, M]] | + | [[Category: Londono-Vallejo AJ]] |
| - | [[Category: Novo, C Lopes]] | + | [[Category: Lopes Novo C]] |
| - | [[Category: Scheibe, M]] | + | [[Category: Mann M]] |
| - | [[Category: Stevense, M]] | + | [[Category: Scheibe M]] |
| - | [[Category: Telomere repeat binding]]
| + | [[Category: Stevense M]] |
| - | [[Category: Telomeric dna]]
| + | |
| - | [[Category: Transcription-dna complex]]
| + | |
| Structural highlights
Function
HMBX1_HUMAN Transcription factor. Isoform 1 acts as a transcriptional repressor. Isoform 4 has very low activity as a transcriptional repressor.[1] [2]
Publication Abstract from PubMed
Telomeres are repetitive DNA structures that, together with the shelterin and the CST complex, protect the ends of chromosomes. Telomere shortening is mitigated in stem and cancer cells through the de novo addition of telomeric repeats by telomerase. Telomere elongation requires the delivery of the telomerase complex to telomeres through a not yet fully understood mechanism. Factors promoting telomerase-telomere interaction are expected to directly bind telomeres and physically interact with the telomerase complex. In search for such a factor we carried out a SILAC-based DNA-protein interaction screen and identified HMBOX1, hereafter referred to as homeobox telomere-binding protein 1 (HOT1). HOT1 directly and specifically binds double-stranded telomere repeats, with the in vivo association correlating with binding to actively processed telomeres. Depletion and overexpression experiments classify HOT1 as a positive regulator of telomere length. Furthermore, immunoprecipitation and cell fractionation analyses show that HOT1 associates with the active telomerase complex and promotes chromatin association of telomerase. Collectively, these findings suggest that HOT1 supports telomerase-dependent telomere elongation.
HOT1 is a mammalian direct telomere repeat-binding protein contributing to telomerase recruitment.,Kappei D, Butter F, Benda C, Scheibe M, Draskovic I, Stevense M, Novo CL, Basquin C, Araki M, Araki K, Krastev DB, Kittler R, Jessberger R, Londono-Vallejo JA, Mann M, Buchholz F EMBO J. 2013 May 17. doi: 10.1038/emboj.2013.105. PMID:23685356[3]
From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.
References
- ↑ Chen S, Saiyin H, Zeng X, Xi J, Liu X, Li X, Yu L. Isolation and functional analysis of human HMBOX1, a homeobox containing protein with transcriptional repressor activity. Cytogenet Genome Res. 2006;114(2):131-6. PMID:16825764 doi:http://dx.doi.org/10.1159/000093328
- ↑ Zhang M, Chen S, Li Q, Ling Y, Zhang J, Yu L. Characterization of a novel human HMBOX1 splicing variant lacking the homeodomain and with attenuated transcription repressor activity. Mol Biol Rep. 2010 Jul;37(6):2767-72. doi: 10.1007/s11033-009-9815-9. Epub 2009, Sep 15. PMID:19757162 doi:http://dx.doi.org/10.1007/s11033-009-9815-9
- ↑ Kappei D, Butter F, Benda C, Scheibe M, Draskovic I, Stevense M, Novo CL, Basquin C, Araki M, Araki K, Krastev DB, Kittler R, Jessberger R, Londono-Vallejo JA, Mann M, Buchholz F. HOT1 is a mammalian direct telomere repeat-binding protein contributing to telomerase recruitment. EMBO J. 2013 May 17. doi: 10.1038/emboj.2013.105. PMID:23685356 doi:10.1038/emboj.2013.105
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