This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


4jja

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (11:16, 24 November 2022) (edit) (undo)
 
Line 1: Line 1:
==Crystal structure of a DUF1343 family protein (BF0379) from Bacteroides fragilis NCTC 9343 at 1.30 A resolution==
==Crystal structure of a DUF1343 family protein (BF0379) from Bacteroides fragilis NCTC 9343 at 1.30 A resolution==
-
<StructureSection load='4jja' size='340' side='right' caption='[[4jja]], [[Resolution|resolution]] 1.30&Aring;' scene=''>
+
<StructureSection load='4jja' size='340' side='right'caption='[[4jja]], [[Resolution|resolution]] 1.30&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[4jja]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Bacfn Bacfn]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4JJA OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4JJA FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[4jja]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacteroides_fragilis_NCTC_9343 Bacteroides fragilis NCTC 9343]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4JJA OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4JJA FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene></td></tr>
+
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4jja FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4jja OCA], [https://pdbe.org/4jja PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4jja RCSB], [https://www.ebi.ac.uk/pdbsum/4jja PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4jja ProSAT]</span></td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">BF0379, BF9343_0369, YP_210109.1 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=272559 BACFN])</td></tr>
+
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4jja FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4jja OCA], [http://pdbe.org/4jja PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4jja RCSB], [http://www.ebi.ac.uk/pdbsum/4jja PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4jja ProSAT]</span></td></tr>
+
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/Q5LI79_BACFN Q5LI79_BACFN]
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Bacfn]]
+
[[Category: Bacteroides fragilis NCTC 9343]]
-
[[Category: Structural genomic]]
+
[[Category: Large Structures]]
-
[[Category: Duf1343]]
+
-
[[Category: Jcsg]]
+
-
[[Category: Pf07075 family protein]]
+
-
[[Category: PSI, Protein structure initiative]]
+
-
[[Category: Psi-biology]]
+
-
[[Category: Unknown function]]
+

Current revision

Crystal structure of a DUF1343 family protein (BF0379) from Bacteroides fragilis NCTC 9343 at 1.30 A resolution

PDB ID 4jja

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools