4jkv

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 1: Line 1:
==Structure of the human smoothened 7TM receptor in complex with an antitumor agent==
==Structure of the human smoothened 7TM receptor in complex with an antitumor agent==
-
<StructureSection load='4jkv' size='340' side='right' caption='[[4jkv]], [[Resolution|resolution]] 2.45&Aring;' scene=''>
+
<StructureSection load='4jkv' size='340' side='right'caption='[[4jkv]], [[Resolution|resolution]] 2.45&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[4jkv]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/"bacillus_coli"_migula_1895 "bacillus coli" migula 1895]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4JKV OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4JKV FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[4jkv]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli] and [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4JKV OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4JKV FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=1KS:4-FLUORO-N-METHYL-N-{1-[4-(1-METHYL-1H-PYRAZOL-5-YL)PHTHALAZIN-1-YL]PIPERIDIN-4-YL}-2-(TRIFLUOROMETHYL)BENZAMIDE'>1KS</scene>, <scene name='pdbligand=OLA:OLEIC+ACID'>OLA</scene>, <scene name='pdbligand=OLC:(2R)-2,3-DIHYDROXYPROPYL+(9Z)-OCTADEC-9-ENOATE'>OLC</scene>, <scene name='pdbligand=PEG:DI(HYDROXYETHYL)ETHER'>PEG</scene>, <scene name='pdbligand=PG4:TETRAETHYLENE+GLYCOL'>PG4</scene>, <scene name='pdbligand=PGE:TRIETHYLENE+GLYCOL'>PGE</scene></td></tr>
+
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=1KS:4-FLUORO-N-METHYL-N-{1-[4-(1-METHYL-1H-PYRAZOL-5-YL)PHTHALAZIN-1-YL]PIPERIDIN-4-YL}-2-(TRIFLUOROMETHYL)BENZAMIDE'>1KS</scene>, <scene name='pdbligand=OLA:OLEIC+ACID'>OLA</scene>, <scene name='pdbligand=OLC:(2R)-2,3-DIHYDROXYPROPYL+(9Z)-OCTADEC-9-ENOATE'>OLC</scene>, <scene name='pdbligand=PEG:DI(HYDROXYETHYL)ETHER'>PEG</scene>, <scene name='pdbligand=PG4:TETRAETHYLENE+GLYCOL'>PG4</scene>, <scene name='pdbligand=PGE:TRIETHYLENE+GLYCOL'>PGE</scene></td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">cybC, SMO_HUMAN, SMO, SMOH ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=562 "Bacillus coli" Migula 1895])</td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4jkv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4jkv OCA], [https://pdbe.org/4jkv PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4jkv RCSB], [https://www.ebi.ac.uk/pdbsum/4jkv PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4jkv ProSAT]</span></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4jkv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4jkv OCA], [http://pdbe.org/4jkv PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4jkv RCSB], [http://www.ebi.ac.uk/pdbsum/4jkv PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4jkv ProSAT]</span></td></tr>
+
</table>
</table>
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/C562_ECOLX C562_ECOLX]] Electron-transport protein of unknown function.
+
[https://www.uniprot.org/uniprot/SMO_HUMAN SMO_HUMAN] G protein-coupled receptor that probably associates with the patched protein (PTCH) to transduce the hedgehog's proteins signal. Binding of sonic hedgehog (SHH) to its receptor patched is thought to prevent normal inhibition by patched of smoothened (SMO). Required for the accumulation of KIF7 and GLI3 in the cilia.<ref>PMID:19592253</ref> [https://www.uniprot.org/uniprot/C562_ECOLX C562_ECOLX] Electron-transport protein of unknown function.
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 23: Line 22:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Bacillus coli migula 1895]]
+
[[Category: Escherichia coli]]
-
[[Category: Cherezov, V]]
+
[[Category: Homo sapiens]]
-
[[Category: GPCR, GPCR Network]]
+
[[Category: Large Structures]]
-
[[Category: Han, G W]]
+
[[Category: Cherezov V]]
-
[[Category: Huang, X]]
+
[[Category: Han GW]]
-
[[Category: Katritch, V]]
+
[[Category: Huang X]]
-
[[Category: Liu, W]]
+
[[Category: Katritch V]]
-
[[Category: Roth, B L]]
+
[[Category: Liu W]]
-
[[Category: Siu, F Y]]
+
[[Category: Roth BL]]
-
[[Category: Stevens, R C]]
+
[[Category: Siu FY]]
-
[[Category: Wang, C]]
+
[[Category: Stevens RC]]
-
[[Category: Wu, H]]
+
[[Category: Wang C]]
-
[[Category: Antitumor agent]]
+
[[Category: Wu H]]
-
[[Category: Gpcr]]
+
-
[[Category: Gpcr network]]
+
-
[[Category: Human smoothened receptor]]
+
-
[[Category: Membrane]]
+
-
[[Category: Membrane protein]]
+
-
[[Category: Novel protein engineering]]
+
-
[[Category: Psi-biology]]
+
-
[[Category: Structural genomic]]
+

Revision as of 11:19, 24 November 2022

Structure of the human smoothened 7TM receptor in complex with an antitumor agent

PDB ID 4jkv

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools