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4jy3

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==Crystal structure of 2-methyl-3-hydroxypyridine-5-carboxylic acid oxygenase, 5-pyridoxic acid bound form==
==Crystal structure of 2-methyl-3-hydroxypyridine-5-carboxylic acid oxygenase, 5-pyridoxic acid bound form==
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<StructureSection load='4jy3' size='340' side='right' caption='[[4jy3]], [[Resolution|resolution]] 1.77&Aring;' scene=''>
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<StructureSection load='4jy3' size='340' side='right'caption='[[4jy3]], [[Resolution|resolution]] 1.77&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[4jy3]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Mesorhizobium_loti Mesorhizobium loti]. This structure supersedes the now removed PDB entries [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=3ali 3ali] and [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=4h28 4h28]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4JY3 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4JY3 FirstGlance]. <br>
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<table><tr><td colspan='2'>[[4jy3]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Mesorhizobium_japonicum_MAFF_303099 Mesorhizobium japonicum MAFF 303099]. This structure supersedes the now removed PDB entries [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=3ali 3ali] and [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=4h28 4h28]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4JY3 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4JY3 FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=5PR:5-HYDROXY-4-(HYDROXYMETHYL)-6-METHYLPYRIDINE-3-CARBOXYLIC+ACID'>5PR</scene>, <scene name='pdbligand=BME:BETA-MERCAPTOETHANOL'>BME</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=FAD:FLAVIN-ADENINE+DINUCLEOTIDE'>FAD</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene></td></tr>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=5PR:5-HYDROXY-4-(HYDROXYMETHYL)-6-METHYLPYRIDINE-3-CARBOXYLIC+ACID'>5PR</scene>, <scene name='pdbligand=BME:BETA-MERCAPTOETHANOL'>BME</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=FAD:FLAVIN-ADENINE+DINUCLEOTIDE'>FAD</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene></td></tr>
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<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[4jy2|4jy2]]</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4jy3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4jy3 OCA], [https://pdbe.org/4jy3 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4jy3 RCSB], [https://www.ebi.ac.uk/pdbsum/4jy3 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4jy3 ProSAT]</span></td></tr>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">mlr6788 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=266835 Mesorhizobium loti])</td></tr>
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<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/3-hydroxy-2-methylpyridinecarboxylate_dioxygenase 3-hydroxy-2-methylpyridinecarboxylate dioxygenase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.14.12.4 1.14.12.4] </span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4jy3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4jy3 OCA], [http://pdbe.org/4jy3 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4jy3 RCSB], [http://www.ebi.ac.uk/pdbsum/4jy3 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4jy3 ProSAT]</span></td></tr>
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</table>
</table>
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== Function ==
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[https://www.uniprot.org/uniprot/Q988D3_RHILO Q988D3_RHILO]
__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: 3-hydroxy-2-methylpyridinecarboxylate dioxygenase]]
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[[Category: Large Structures]]
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[[Category: Mesorhizobium loti]]
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[[Category: Mesorhizobium japonicum MAFF 303099]]
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[[Category: Hayashi, H]]
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[[Category: Hayashi H]]
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[[Category: Kamitori, S]]
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[[Category: Kamitori S]]
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[[Category: Kobayashi, J]]
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[[Category: Kobayashi J]]
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[[Category: Mikami, B]]
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[[Category: Mikami B]]
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[[Category: Mizutani, K]]
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[[Category: Mizutani K]]
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[[Category: Takahashi, N]]
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[[Category: Takahashi N]]
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[[Category: Yagi, T]]
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[[Category: Yagi T]]
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[[Category: Yoshida, H]]
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[[Category: Yoshida H]]
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[[Category: 3-hydroxypyridine-5-carboxylic acid]]
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[[Category: Fad binding motif]]
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[[Category: Flavoenzyme]]
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[[Category: Oxidoreductase]]
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Revision as of 11:30, 30 November 2022

Crystal structure of 2-methyl-3-hydroxypyridine-5-carboxylic acid oxygenase, 5-pyridoxic acid bound form

PDB ID 4jy3

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