4k25

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 1: Line 1:
==Crystal Structure of yeast Qri7 homodimer==
==Crystal Structure of yeast Qri7 homodimer==
-
<StructureSection load='4k25' size='340' side='right' caption='[[4k25]], [[Resolution|resolution]] 2.88&Aring;' scene=''>
+
<StructureSection load='4k25' size='340' side='right'caption='[[4k25]], [[Resolution|resolution]] 2.88&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[4k25]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Baker's_yeast Baker's yeast]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4K25 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4K25 FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[4k25]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Saccharomyces_cerevisiae_S288C Saccharomyces cerevisiae S288C]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4K25 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4K25 FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
+
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
-
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4k25 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4k25 OCA], [https://pdbe.org/4k25 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4k25 RCSB], [https://www.ebi.ac.uk/pdbsum/4k25 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4k25 ProSAT]</span></td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">QRI7, YDL104C, D2366 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=559292 Baker's yeast])</td></tr>
+
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4k25 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4k25 OCA], [http://pdbe.org/4k25 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4k25 RCSB], [http://www.ebi.ac.uk/pdbsum/4k25 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4k25 ProSAT]</span></td></tr>
+
</table>
</table>
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/QRI7_YEAST QRI7_YEAST]] Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in mitochondrial tRNAs that read codons beginning with adenine. Involved in mitochondrial genome maintenance.<ref>PMID:21183954</ref> <ref>PMID:21285948</ref>
+
[https://www.uniprot.org/uniprot/QRI7_YEAST QRI7_YEAST] Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in mitochondrial tRNAs that read codons beginning with adenine. Involved in mitochondrial genome maintenance.<ref>PMID:21183954</ref> <ref>PMID:21285948</ref>
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 24: Line 22:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Baker's yeast]]
+
[[Category: Large Structures]]
-
[[Category: Mao, D Y]]
+
[[Category: Saccharomyces cerevisiae S288C]]
-
[[Category: Neculai, D]]
+
[[Category: Mao DY]]
-
[[Category: Sicheri, F]]
+
[[Category: Neculai D]]
-
[[Category: Wan, L]]
+
[[Category: Sicheri F]]
-
[[Category: Askha-fold]]
+
[[Category: Wan L]]
-
[[Category: Biosynthetic protein]]
+
-
[[Category: Mitochondria]]
+
-
[[Category: N6-threonylcarbamoylation enzyme]]
+
-
[[Category: Rna and metabolite binding]]
+

Revision as of 11:37, 30 November 2022

Crystal Structure of yeast Qri7 homodimer

PDB ID 4k25

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools