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| ==Structure of the N-acetyltransferase domain of human N-acetylglutamate synthase== | | ==Structure of the N-acetyltransferase domain of human N-acetylglutamate synthase== |
- | <StructureSection load='4k30' size='340' side='right' caption='[[4k30]], [[Resolution|resolution]] 2.10Å' scene=''> | + | <StructureSection load='4k30' size='340' side='right'caption='[[4k30]], [[Resolution|resolution]] 2.10Å' scene=''> |
| == Structural highlights == | | == Structural highlights == |
- | <table><tr><td colspan='2'>[[4k30]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Human Human]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4K30 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4K30 FirstGlance]. <br> | + | <table><tr><td colspan='2'>[[4k30]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4K30 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4K30 FirstGlance]. <br> |
- | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=NLG:N-ACETYL-L-GLUTAMATE'>NLG</scene></td></tr> | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=NLG:N-ACETYL-L-GLUTAMATE'>NLG</scene></td></tr> |
- | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">NAGS ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 HUMAN])</td></tr>
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4k30 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4k30 OCA], [https://pdbe.org/4k30 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4k30 RCSB], [https://www.ebi.ac.uk/pdbsum/4k30 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4k30 ProSAT]</span></td></tr> |
- | <tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Amino-acid_N-acetyltransferase Amino-acid N-acetyltransferase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.3.1.1 2.3.1.1] </span></td></tr>
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- | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4k30 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4k30 OCA], [http://pdbe.org/4k30 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4k30 RCSB], [http://www.ebi.ac.uk/pdbsum/4k30 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4k30 ProSAT]</span></td></tr> | + | |
| </table> | | </table> |
| == Disease == | | == Disease == |
- | [[http://www.uniprot.org/uniprot/NAGS_HUMAN NAGS_HUMAN]] Hyperammonemia due to N-acetylglutamate synthetase deficiency. The disease is caused by mutations affecting the gene represented in this entry. | + | [https://www.uniprot.org/uniprot/NAGS_HUMAN NAGS_HUMAN] Hyperammonemia due to N-acetylglutamate synthetase deficiency. The disease is caused by mutations affecting the gene represented in this entry. |
| == Function == | | == Function == |
- | [[http://www.uniprot.org/uniprot/NAGS_HUMAN NAGS_HUMAN]] Plays a role in the regulation of ureagenesis by producing variable amounts of N-acetylglutamate (NAG), thus modulating carbamoylphosphate synthase I (CPSI) activity. | + | [https://www.uniprot.org/uniprot/NAGS_HUMAN NAGS_HUMAN] Plays a role in the regulation of ureagenesis by producing variable amounts of N-acetylglutamate (NAG), thus modulating carbamoylphosphate synthase I (CPSI) activity. |
| <div style="background-color:#fffaf0;"> | | <div style="background-color:#fffaf0;"> |
| == Publication Abstract from PubMed == | | == Publication Abstract from PubMed == |
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| __TOC__ | | __TOC__ |
| </StructureSection> | | </StructureSection> |
- | [[Category: Amino-acid N-acetyltransferase]] | + | [[Category: Homo sapiens]] |
- | [[Category: Human]] | + | [[Category: Large Structures]] |
- | [[Category: Allewell, N M]] | + | [[Category: Allewell NM]] |
- | [[Category: Jin, Z]] | + | [[Category: Jin Z]] |
- | [[Category: Shi, D]] | + | [[Category: Shi D]] |
- | [[Category: Tuchman, M]] | + | [[Category: Tuchman M]] |
- | [[Category: Zhao, G]] | + | [[Category: Zhao G]] |
- | [[Category: Gcn5-ralated n-acetyltransferase fold]]
| + | |
- | [[Category: Synthase]]
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- | [[Category: Transferase]]
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| Structural highlights
Disease
NAGS_HUMAN Hyperammonemia due to N-acetylglutamate synthetase deficiency. The disease is caused by mutations affecting the gene represented in this entry.
Function
NAGS_HUMAN Plays a role in the regulation of ureagenesis by producing variable amounts of N-acetylglutamate (NAG), thus modulating carbamoylphosphate synthase I (CPSI) activity.
Publication Abstract from PubMed
N-acetylglutamate synthase (NAGS) catalyzes the conversion of AcCoA and L-glutamate to CoA and N-acetyl-L-glutamate (NAG), an obligate cofactor for carbamyl phosphate synthetase I (CPSI) in the urea cycle. NAGS deficiency results in elevated levels of plasma ammonia which is neurotoxic. We report herein the first crystal structure of human NAGS, that of the catalytic N-acetyltransferase (hNAT) domain with N-acetyl-L-glutamate bound at 2.1 A resolution. Functional studies indicate that the hNAT domain retains catalytic activity in the absence of the amino acid kinase (AAK) domain. Instead, the major functions of the AAK domain appear to be providing a binding site for the allosteric activator, L-arginine, and an N-terminal proline-rich motif that is likely to function in signal transduction to CPS1. Crystalline hNAT forms a dimer similar to the NAT-NAT dimers that form in crystals of bifunctional N-acetylglutamate synthase/kinase (NAGS/K) from Maricaulis maris and also exists as a dimer in solution. The structure of the NAG binding site, in combination with mutagenesis studies, provide insights into the catalytic mechanism. We also show that native NAGS from human and mouse exists in tetrameric form, similar to those of bifunctional NAGS/K.
Crystal structure of the N-acetyltransferase domain of human N-acetyl-L-glutamate synthase in complex with N-acetyl-L-glutamate provides insights into its catalytic and regulatory mechanisms.,Zhao G, Jin Z, Allewell NM, Tuchman M, Shi D PLoS One. 2013 Jul 24;8(7):e70369. doi: 10.1371/journal.pone.0070369. Print 2013. PMID:23894642[1]
From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.
References
- ↑ Zhao G, Jin Z, Allewell NM, Tuchman M, Shi D. Crystal structure of the N-acetyltransferase domain of human N-acetyl-L-glutamate synthase in complex with N-acetyl-L-glutamate provides insights into its catalytic and regulatory mechanisms. PLoS One. 2013 Jul 24;8(7):e70369. doi: 10.1371/journal.pone.0070369. Print 2013. PMID:23894642 doi:10.1371/journal.pone.0070369
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