This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


4k35

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (11:38, 30 November 2022) (edit) (undo)
 
Line 1: Line 1:
==The structure of a glycoside hydrolase family 81 endo-[beta]-1,3-glucanase==
==The structure of a glycoside hydrolase family 81 endo-[beta]-1,3-glucanase==
-
<StructureSection load='4k35' size='340' side='right' caption='[[4k35]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
+
<StructureSection load='4k35' size='340' side='right'caption='[[4k35]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[4k35]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Atcc_16457 Atcc 16457]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4K35 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4K35 FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[4k35]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Rhizomucor_miehei Rhizomucor miehei]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4K35 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4K35 FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=MPD:(4S)-2-METHYL-2,4-PENTANEDIOL'>MPD</scene>, <scene name='pdbligand=TRS:2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL'>TRS</scene></td></tr>
+
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MPD:(4S)-2-METHYL-2,4-PENTANEDIOL'>MPD</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=TRS:2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL'>TRS</scene></td></tr>
-
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4k35 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4k35 OCA], [https://pdbe.org/4k35 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4k35 RCSB], [https://www.ebi.ac.uk/pdbsum/4k35 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4k35 ProSAT]</span></td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[4k3a|4k3a]]</td></tr>
+
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">Rhizomucor miehei ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=4839 ATCC 16457])</td></tr>
+
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Glucan_endo-1,3-beta-D-glucosidase Glucan endo-1,3-beta-D-glucosidase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.2.1.39 3.2.1.39] </span></td></tr>
+
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4k35 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4k35 OCA], [http://pdbe.org/4k35 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4k35 RCSB], [http://www.ebi.ac.uk/pdbsum/4k35 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4k35 ProSAT]</span></td></tr>
+
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/A0A023I7E1_RHIMI A0A023I7E1_RHIMI]
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 22: Line 20:
==See Also==
==See Also==
-
*[[Glucanase|Glucanase]]
+
*[[Glucanase 3D structures|Glucanase 3D structures]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Atcc 16457]]
+
[[Category: Large Structures]]
-
[[Category: Glucan endo-1,3-beta-D-glucosidase]]
+
[[Category: Rhizomucor miehei]]
-
[[Category: Chen, Z Z]]
+
[[Category: Chen ZZ]]
-
[[Category: Hilgenfeld, R]]
+
[[Category: Hilgenfeld R]]
-
[[Category: Jiang, Z Q]]
+
[[Category: Jiang ZQ]]
-
[[Category: Yan, Q J]]
+
[[Category: Yan QJ]]
-
[[Category: Yang, S Q]]
+
[[Category: Yang SQ]]
-
[[Category: Zhou, P]]
+
[[Category: Zhou P]]
-
[[Category: 3-glucanase]]
+
-
[[Category: Beta-1]]
+
-
[[Category: Endo-beta-1]]
+
-
[[Category: Extracellular]]
+
-
[[Category: Glucoside hydrolases family 81]]
+
-
[[Category: Hydrolase]]
+
-
[[Category: Rhzmucor miehei]]
+
-
[[Category: Supersandwich]]
+

Current revision

The structure of a glycoside hydrolase family 81 endo-[beta]-1,3-glucanase

PDB ID 4k35

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools