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| ==Crystal Structure of the Vps33-Vps16 HOPS subcomplex from Chaetomium thermophilum== | | ==Crystal Structure of the Vps33-Vps16 HOPS subcomplex from Chaetomium thermophilum== |
- | <StructureSection load='4kmo' size='340' side='right' caption='[[4kmo]], [[Resolution|resolution]] 2.60Å' scene=''> | + | <StructureSection load='4kmo' size='340' side='right'caption='[[4kmo]], [[Resolution|resolution]] 2.60Å' scene=''> |
| == Structural highlights == | | == Structural highlights == |
- | <table><tr><td colspan='2'>[[4kmo]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Chatd Chatd]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4KMO OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4KMO FirstGlance]. <br> | + | <table><tr><td colspan='2'>[[4kmo]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Chaetomium_thermophilum_var._thermophilum_DSM_1495 Chaetomium thermophilum var. thermophilum DSM 1495]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4KMO OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4KMO FirstGlance]. <br> |
- | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr> | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr> |
- | <tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4kmo FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4kmo OCA], [https://pdbe.org/4kmo PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4kmo RCSB], [https://www.ebi.ac.uk/pdbsum/4kmo PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4kmo ProSAT]</span></td></tr> |
- | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[4jc8|4jc8]]</td></tr>
| + | |
- | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">CTHT_0057760 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=759272 CHATD]), CTHT_0026760 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=759272 CHATD])</td></tr>
| + | |
- | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4kmo FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4kmo OCA], [http://pdbe.org/4kmo PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4kmo RCSB], [http://www.ebi.ac.uk/pdbsum/4kmo PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4kmo ProSAT]</span></td></tr> | + | |
| </table> | | </table> |
| + | == Function == |
| + | [https://www.uniprot.org/uniprot/G0SCM5_CHATD G0SCM5_CHATD] |
| <div style="background-color:#fffaf0;"> | | <div style="background-color:#fffaf0;"> |
| == Publication Abstract from PubMed == | | == Publication Abstract from PubMed == |
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| __TOC__ | | __TOC__ |
| </StructureSection> | | </StructureSection> |
- | [[Category: Chatd]] | + | [[Category: Chaetomium thermophilum var. thermophilum DSM 1495]] |
- | [[Category: Baker, R W]] | + | [[Category: Large Structures]] |
- | [[Category: Hughson, F M]] | + | [[Category: Baker RW]] |
- | [[Category: Jeffrey, P D]] | + | [[Category: Hughson FM]] |
- | [[Category: Hops complex]] | + | [[Category: Jeffrey PD]] |
- | [[Category: Membrane trafficking]]
| + | |
- | [[Category: Sm protein]]
| + | |
- | [[Category: Thermophile]]
| + | |
- | [[Category: Transport protein]]
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| Structural highlights
Function
G0SCM5_CHATD
Publication Abstract from PubMed
Intracellular membrane fusion requires the regulated assembly of SNARE (soluble N-ethylmaleimide-sensitive factor (NSF) attachment protein receptor) proteins anchored in the apposed membranes. To exert the force required to drive fusion between lipid bilayers, juxtamembrane SNARE motifs zipper into four-helix bundles. Importantly, SNARE function is regulated by additional factors, none more extensively studied than the SM (Sec1/Munc18-like) proteins. SM proteins interact with both individual SNAREs and SNARE complexes, likely chaperoning SNARE complex formation and protecting assembly intermediates from premature disassembly by NSF. Four families of SM proteins have been identified, and representative members of two of these families (Sec1/Munc18 and Sly1) have been structurally characterized. We report here the 2.6 A resolution crystal structure of an SM protein from the third family, Vps33. Although Vps33 shares with the first two families the same basic three-domain architecture, domain 1 is displaced by 15 A, accompanied by a 40 degrees rotation. A unique feature of the Vps33 family of SM proteins is that its members function as stable subunits within a multi-subunit tethering complex called HOPS (homotypic fusion and vacuolar protein sorting). Integration into the HOPS complex depends on the interaction between Vps33 and a second HOPS subunit, Vps16. The crystal structure of Vps33 bound to a C-terminal portion of Vps16, also at 2.6 A resolution, reveals the structural basis for this interaction. Despite the extensive interface between the two HOPS subunits, the conformation of Vps33 is only subtly affected by binding to Vps16.
Crystal Structures of the Sec1/Munc18 (SM) Protein Vps33, Alone and Bound to the Homotypic Fusion and Vacuolar Protein Sorting (HOPS) Subunit Vps16*,Baker RW, Jeffrey PD, Hughson FM PLoS One. 2013 Jun 26;8(6):e67409. Print 2013. PMID:23840694[1]
From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.
References
- ↑ Baker RW, Jeffrey PD, Hughson FM. Crystal Structures of the Sec1/Munc18 (SM) Protein Vps33, Alone and Bound to the Homotypic Fusion and Vacuolar Protein Sorting (HOPS) Subunit Vps16* PLoS One. 2013 Jun 26;8(6):e67409. Print 2013. PMID:23840694 doi:http://dx.doi.org/10.1371/journal.pone.0067409
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