4kvr

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 1: Line 1:
==Crystal Structure of Prochlorococcus marinus aldehyde-deformylating oxygenase (mutant V41Y)==
==Crystal Structure of Prochlorococcus marinus aldehyde-deformylating oxygenase (mutant V41Y)==
-
<StructureSection load='4kvr' size='340' side='right' caption='[[4kvr]], [[Resolution|resolution]] 1.88&Aring;' scene=''>
+
<StructureSection load='4kvr' size='340' side='right'caption='[[4kvr]], [[Resolution|resolution]] 1.88&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[4kvr]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Promm Promm]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4KVR OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4KVR FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[4kvr]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Prochlorococcus_marinus_str._MIT_9313 Prochlorococcus marinus str. MIT 9313]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4KVR OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4KVR FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=6NA:HEXANOIC+ACID'>6NA</scene>, <scene name='pdbligand=FE:FE+(III)+ION'>FE</scene></td></tr>
+
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=6NA:HEXANOIC+ACID'>6NA</scene>, <scene name='pdbligand=FE:FE+(III)+ION'>FE</scene></td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[2oc5|2oc5]], [[4kvq|4kvq]], [[4kvs|4kvs]]</td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4kvr FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4kvr OCA], [https://pdbe.org/4kvr PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4kvr RCSB], [https://www.ebi.ac.uk/pdbsum/4kvr PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4kvr ProSAT]</span></td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">PMT_1231 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=74547 PROMM])</td></tr>
+
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Octadecanal_decarbonylase Octadecanal decarbonylase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.1.99.5 4.1.99.5] </span></td></tr>
+
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4kvr FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4kvr OCA], [http://pdbe.org/4kvr PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4kvr RCSB], [http://www.ebi.ac.uk/pdbsum/4kvr PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4kvr ProSAT]</span></td></tr>
+
</table>
</table>
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/ALDEC_PROMM ALDEC_PROMM]] Catalyzes the decarbonylation of fatty aldehydes to alkanes. Requires the presence of ferredoxin, ferredoxin reductase and NADPH for in vitro decarbonylase activity (By similarity). Involved in the biosynthesis of alkanes, mainly heptadecane and pentadecane.<ref>PMID:20671186</ref>
+
[https://www.uniprot.org/uniprot/ALDEC_PROMM ALDEC_PROMM] Catalyzes the decarbonylation of fatty aldehydes to alkanes. Requires the presence of ferredoxin, ferredoxin reductase and NADPH for in vitro decarbonylase activity (By similarity). Involved in the biosynthesis of alkanes, mainly heptadecane and pentadecane.<ref>PMID:20671186</ref>
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 25: Line 22:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Octadecanal decarbonylase]]
+
[[Category: Large Structures]]
-
[[Category: Promm]]
+
[[Category: Prochlorococcus marinus str. MIT 9313]]
-
[[Category: Das, D]]
+
[[Category: Das D]]
-
[[Category: Khara, B]]
+
[[Category: Khara B]]
-
[[Category: Levy, C W]]
+
[[Category: Levy CW]]
-
[[Category: Leys, D]]
+
[[Category: Leys D]]
-
[[Category: Mansell, D]]
+
[[Category: Mansell D]]
-
[[Category: Marsh, E N.G]]
+
[[Category: Marsh ENG]]
-
[[Category: Menon, N]]
+
[[Category: Menon N]]
-
[[Category: Scrutton, N S]]
+
[[Category: Scrutton NS]]
-
[[Category: Aldehyde-deformylating oxygenase]]
+
-
[[Category: Oxidoreductase]]
+
-
[[Category: Propane production]]
+

Revision as of 09:17, 7 December 2022

Crystal Structure of Prochlorococcus marinus aldehyde-deformylating oxygenase (mutant V41Y)

PDB ID 4kvr

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/4kvr"
Personal tools