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| | ==Crystal structure of the plantazolicin methyltransferase BamL in complex with SAH== | | ==Crystal structure of the plantazolicin methyltransferase BamL in complex with SAH== |
| - | <StructureSection load='4kvz' size='340' side='right' caption='[[4kvz]], [[Resolution|resolution]] 1.75Å' scene=''> | + | <StructureSection load='4kvz' size='340' side='right'caption='[[4kvz]], [[Resolution|resolution]] 1.75Å' scene=''> |
| | == Structural highlights == | | == Structural highlights == |
| - | <table><tr><td colspan='2'>[[4kvz]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/"bacillus_amyloliquifaciens"_(sic)_fukumoto_1943 "bacillus amyloliquifaciens" (sic) fukumoto 1943]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4KVZ OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4KVZ FirstGlance]. <br> | + | <table><tr><td colspan='2'>[[4kvz]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacillus_amyloliquefaciens Bacillus amyloliquefaciens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4KVZ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4KVZ FirstGlance]. <br> |
| - | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=SAH:S-ADENOSYL-L-HOMOCYSTEINE'>SAH</scene></td></tr> | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=SAH:S-ADENOSYL-L-HOMOCYSTEINE'>SAH</scene></td></tr> |
| - | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[4kwc|4kwc]]</td></tr>
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4kvz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4kvz OCA], [https://pdbe.org/4kvz PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4kvz RCSB], [https://www.ebi.ac.uk/pdbsum/4kvz PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4kvz ProSAT]</span></td></tr> |
| - | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">ptnL ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1390 "Bacillus amyloliquifaciens" (sic) Fukumoto 1943])</td></tr>
| + | |
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4kvz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4kvz OCA], [http://pdbe.org/4kvz PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4kvz RCSB], [http://www.ebi.ac.uk/pdbsum/4kvz PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4kvz ProSAT]</span></td></tr> | + | |
| | </table> | | </table> |
| | + | == Function == |
| | + | [https://www.uniprot.org/uniprot/D3VMM1_BACAM D3VMM1_BACAM] |
| | <div style="background-color:#fffaf0;"> | | <div style="background-color:#fffaf0;"> |
| | == Publication Abstract from PubMed == | | == Publication Abstract from PubMed == |
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| | __TOC__ | | __TOC__ |
| | </StructureSection> | | </StructureSection> |
| - | [[Category: Hao, Y]] | + | [[Category: Bacillus amyloliquefaciens]] |
| - | [[Category: Nair, S K]] | + | [[Category: Large Structures]] |
| - | [[Category: Methyltransferase]] | + | [[Category: Hao Y]] |
| - | [[Category: Natural product]] | + | [[Category: Nair SK]] |
| - | [[Category: Tomm]]
| + | |
| - | [[Category: Transferase]]
| + | |
| Structural highlights
Function
D3VMM1_BACAM
Publication Abstract from PubMed
Plantazolicin (PZN), a polyheterocyclic, Nalpha,Nalpha-dimethylarginine-containing antibiotic, harbors remarkably specific bactericidal activity toward strains of Bacillus anthracis, the causative agent of anthrax. Previous studies demonstrated that genetic deletion of the S-adenosyl-l-methionine-dependent methyltransferase from the PZN biosynthetic gene cluster results in the formation of desmethylPZN, which is devoid of antibiotic activity. Here we describe the in vitro reconstitution, mutational analysis, and X-ray crystallographic structure of the PZN methyltransferase. Unlike all other known small molecule methyltransferases, which act upon diverse substrates in vitro, the PZN methyltransferase is uncharacteristically limited in substrate scope and functions only on desmethylPZN and close derivatives. The crystal structures of two related PZN methyltransferases, solved to 1.75 A (Bacillus amyloliquefaciens) and 2.0 A (Bacillus pumilus), reveal a deep, narrow cavity, putatively functioning as the binding site for desmethylPZN. The narrowness of this cavity provides a framework for understanding the molecular basis of the extreme substrate selectivity. Analysis of a panel of point mutations to the methyltransferase from B. amyloliquefaciens allowed the identification of residues of structural and catalytic importance. These findings further our understanding of one set of orthologous enzymes involved in thiazole/oxazole-modified microcin biosynthesis, a rapidly growing sector of natural products research.
Structural and functional insight into an unexpectedly selective N-methyltransferase involved in plantazolicin biosynthesis.,Lee J, Hao Y, Blair PM, Melby JO, Agarwal V, Burkhart BJ, Nair SK, Mitchell DA Proc Natl Acad Sci U S A. 2013 Jul 22. PMID:23878226[1]
From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.
References
- ↑ Lee J, Hao Y, Blair PM, Melby JO, Agarwal V, Burkhart BJ, Nair SK, Mitchell DA. Structural and functional insight into an unexpectedly selective N-methyltransferase involved in plantazolicin biosynthesis. Proc Natl Acad Sci U S A. 2013 Jul 22. PMID:23878226 doi:10.1073/pnas.1306101110
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