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4kyi

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Current revision (09:21, 7 December 2022) (edit) (undo)
 
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<StructureSection load='4kyi' size='340' side='right'caption='[[4kyi]], [[Resolution|resolution]] 3.08&Aring;' scene=''>
<StructureSection load='4kyi' size='340' side='right'caption='[[4kyi]], [[Resolution|resolution]] 3.08&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[4kyi]] is a 8 chain structure with sequence from [http://en.wikipedia.org/wiki/Human Human] and [http://en.wikipedia.org/wiki/Legph Legph]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4KYI OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4KYI FirstGlance]. <br>
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<table><tr><td colspan='2'>[[4kyi]] is a 8 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens] and [https://en.wikipedia.org/wiki/Legionella_pneumophila_subsp._pneumophila_str._Philadelphia_1 Legionella pneumophila subsp. pneumophila str. Philadelphia 1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4KYI OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4KYI FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=GNP:PHOSPHOAMINOPHOSPHONIC+ACID-GUANYLATE+ESTER'>GNP</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=GNP:PHOSPHOAMINOPHOSPHONIC+ACID-GUANYLATE+ESTER'>GNP</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">vipD, lpg2831 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=272624 LEGPH]), RAB5C, RABL ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 HUMAN])</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4kyi FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4kyi OCA], [https://pdbe.org/4kyi PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4kyi RCSB], [https://www.ebi.ac.uk/pdbsum/4kyi PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4kyi ProSAT]</span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4kyi FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4kyi OCA], [http://pdbe.org/4kyi PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4kyi RCSB], [http://www.ebi.ac.uk/pdbsum/4kyi PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4kyi ProSAT]</span></td></tr>
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</table>
</table>
== Function ==
== Function ==
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[[http://www.uniprot.org/uniprot/RAB5C_HUMAN RAB5C_HUMAN]] Protein transport. Probably involved in vesicular traffic (By similarity).
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[https://www.uniprot.org/uniprot/Q5ZRP9_LEGPH Q5ZRP9_LEGPH]
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
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</div>
</div>
<div class="pdbe-citations 4kyi" style="background-color:#fffaf0;"></div>
<div class="pdbe-citations 4kyi" style="background-color:#fffaf0;"></div>
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==See Also==
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*[[Ras-related protein Rab 3D structures|Ras-related protein Rab 3D structures]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Human]]
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[[Category: Homo sapiens]]
[[Category: Large Structures]]
[[Category: Large Structures]]
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[[Category: Legph]]
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[[Category: Legionella pneumophila subsp. pneumophila str. Philadelphia 1]]
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[[Category: Fernandez-Recio, J]]
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[[Category: Fernandez-Recio J]]
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[[Category: Gaspar, A H]]
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[[Category: Gaspar AH]]
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[[Category: Hierro, A]]
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[[Category: Hierro A]]
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[[Category: Lucas, M]]
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[[Category: Lucas M]]
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[[Category: Machner, M P]]
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[[Category: Machner MP]]
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[[Category: Pallara, C]]
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[[Category: Pallara C]]
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[[Category: Rojas, A L]]
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[[Category: Rojas AL]]
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[[Category: Phospholipase]]
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[[Category: Protein binding-transport protein complex]]
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Current revision

Crystal structure of the phospholipase VipD from Legionella pneumophila in complex with the human GTPase Rab5

PDB ID 4kyi

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