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| ==MeaB, A Bacterial Homolog of MMAA, Bound to GDP and crystallized in the presence of GDP and [AlF4]-== | | ==MeaB, A Bacterial Homolog of MMAA, Bound to GDP and crystallized in the presence of GDP and [AlF4]-== |
- | <StructureSection load='4lc1' size='340' side='right' caption='[[4lc1]], [[Resolution|resolution]] 1.80Å' scene=''> | + | <StructureSection load='4lc1' size='340' side='right'caption='[[4lc1]], [[Resolution|resolution]] 1.80Å' scene=''> |
| == Structural highlights == | | == Structural highlights == |
- | <table><tr><td colspan='2'>[[4lc1]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Metea Metea]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4LC1 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4LC1 FirstGlance]. <br> | + | <table><tr><td colspan='2'>[[4lc1]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Methylorubrum_extorquens_AM1 Methylorubrum extorquens AM1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4LC1 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4LC1 FirstGlance]. <br> |
- | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GDP:GUANOSINE-5-DIPHOSPHATE'>GDP</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene></td></tr> | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GDP:GUANOSINE-5-DIPHOSPHATE'>GDP</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene></td></tr> |
- | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[4jyb|4jyb]], [[4jyc|4jyc]], [[2qm7|2qm7]], [[2qm8|2qm8]]</td></tr>
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4lc1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4lc1 OCA], [https://pdbe.org/4lc1 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4lc1 RCSB], [https://www.ebi.ac.uk/pdbsum/4lc1 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4lc1 ProSAT]</span></td></tr> |
- | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">meaB, MexAM1_META1p0188 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=272630 METEA])</td></tr>
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- | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4lc1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4lc1 OCA], [http://pdbe.org/4lc1 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4lc1 RCSB], [http://www.ebi.ac.uk/pdbsum/4lc1 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4lc1 ProSAT]</span></td></tr> | + | |
| </table> | | </table> |
| + | == Function == |
| + | [https://www.uniprot.org/uniprot/C5AP93_METEA C5AP93_METEA] |
| <div style="background-color:#fffaf0;"> | | <div style="background-color:#fffaf0;"> |
| == Publication Abstract from PubMed == | | == Publication Abstract from PubMed == |
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| __TOC__ | | __TOC__ |
| </StructureSection> | | </StructureSection> |
- | [[Category: Metea]] | + | [[Category: Large Structures]] |
- | [[Category: Banerjee, R]] | + | [[Category: Methylorubrum extorquens AM1]] |
- | [[Category: Koutmos, M]] | + | [[Category: Banerjee R]] |
- | [[Category: Lofgren, M]] | + | [[Category: Koutmos M]] |
- | [[Category: Padovani, D]] | + | [[Category: Lofgren M]] |
- | [[Category: Alpha and beta protein]]
| + | [[Category: Padovani D]] |
- | [[Category: Chaperone]]
| + | |
- | [[Category: Metallochaperone]]
| + | |
| Structural highlights
Function
C5AP93_METEA
Publication Abstract from PubMed
MeaB is an accessory GTPase protein involved in the assembly, protection and reactivation of 5'-deoxyadenosylcobalamin-dependent methyl malonyl-CoA mutase (MCM). Mutations in the human ortholog of MeaB result in methylmalonic aciduria, an inborn error of metabolism. G-proteins typically utilize conserved switch I and II motifs for signaling to effector proteins via conformational changes elicited by nucleotide-binding and hydrolysis. Our recent discovery that MeaB employs an unusual switch III region for bidirectional signaling with MCM raised questions about the roles of the switch I and II motifs in MeaB. In this study, we have addressed the functions of conserved switch II residues by performing alanine-scanning mutagenesis. Our results demonstrate that the GTPase activity of MeaB is auto-inhibited by switch II and that this loop is important for coupling nucleotide-sensitive conformational changes in switch III to elicit the multiple chaperone functions of MeaB. Furthermore, we report the structure of MeaB-GDP crystallized in the presence of AlFx- in order to form the putative transition state analog, GDP-AlF4-. The resulting crystal structure and its comparison to related G-proteins supports the conclusion that the catalytic site of MeaB is incomplete in the absence of the GTPase-activating protein, MCM, and therefore unable to stabilize the transition state analog. Favoring an inactive conformation in the absence of the client MCM protein might represent a strategy for suppressing the intrinsic GTPase activity of MeaB in which the switch II loop plays an important role.
Autoinhibition and signalling by the switch II motif in the G-protein chaperone of a radical B12 enzyme.,Lofgren M, Koutmos M, Banerjee R J Biol Chem. 2013 Aug 30. PMID:23996001[1]
From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.
References
- ↑ Lofgren M, Koutmos M, Banerjee R. Autoinhibition and signalling by the switch II motif in the G-protein chaperone of a radical B12 enzyme. J Biol Chem. 2013 Aug 30. PMID:23996001 doi:10.1074/jbc.M113.499970
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