This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


4ld3

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 1: Line 1:
==Structural analysis of the microcephaly protein CPAP G-box domain suggests a role in centriole elongation.==
==Structural analysis of the microcephaly protein CPAP G-box domain suggests a role in centriole elongation.==
-
<StructureSection load='4ld3' size='340' side='right' caption='[[4ld3]], [[Resolution|resolution]] 2.44&Aring;' scene=''>
+
<StructureSection load='4ld3' size='340' side='right'caption='[[4ld3]], [[Resolution|resolution]] 2.44&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[4ld3]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Brachidanio_rerio Brachidanio rerio]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4LD3 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4LD3 FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[4ld3]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Danio_rerio Danio rerio]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4LD3 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4LD3 FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=IPA:ISOPROPYL+ALCOHOL'>IPA</scene></td></tr>
+
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=IPA:ISOPROPYL+ALCOHOL'>IPA</scene></td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[4ld1|4ld1]], [[4lzf|4lzf]]</td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4ld3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4ld3 OCA], [https://pdbe.org/4ld3 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4ld3 RCSB], [https://www.ebi.ac.uk/pdbsum/4ld3 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4ld3 ProSAT]</span></td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">cenpj ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=7955 Brachidanio rerio]), stil, sill, zgc:110502 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=7955 Brachidanio rerio])</td></tr>
+
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4ld3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4ld3 OCA], [http://pdbe.org/4ld3 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4ld3 RCSB], [http://www.ebi.ac.uk/pdbsum/4ld3 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4ld3 ProSAT]</span></td></tr>
+
</table>
</table>
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/STIL_DANRE STIL_DANRE]] Plays an essential role in early embryonic development.
+
[https://www.uniprot.org/uniprot/E7FCY1_DANRE E7FCY1_DANRE]
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 24: Line 22:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Brachidanio rerio]]
+
[[Category: Danio rerio]]
-
[[Category: Hatzopoulos, G N]]
+
[[Category: Large Structures]]
-
[[Category: Vakonakis, I]]
+
[[Category: Hatzopoulos GN]]
-
[[Category: Beta-sheet]]
+
[[Category: Vakonakis I]]
-
[[Category: Centriole organisation]]
+
-
[[Category: G-box]]
+
-
[[Category: Protein binding]]
+
-
[[Category: Structural protein]]
+

Revision as of 10:52, 14 December 2022

Structural analysis of the microcephaly protein CPAP G-box domain suggests a role in centriole elongation.

PDB ID 4ld3

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools