1jd2

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[[Image:1jd2.gif|left|200px]]
[[Image:1jd2.gif|left|200px]]
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{{Structure
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|PDB= 1jd2 |SIZE=350|CAPTION= <scene name='initialview01'>1jd2</scene>, resolution 3.0&Aring;
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The line below this paragraph, containing "STRUCTURE_1jd2", creates the "Structure Box" on the page.
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|SITE=
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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|LIGAND= <scene name='pdbligand=95A:TMC-95A'>95A</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Proteasome_endopeptidase_complex Proteasome endopeptidase complex], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.4.25.1 3.4.25.1] </span>
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or leave the SCENE parameter empty for the default display.
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|GENE=
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|DOMAIN=
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{{STRUCTURE_1jd2| PDB=1jd2 | SCENE= }}
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|RELATEDENTRY=[[1ryp|1RYP]], [[1g0u|1G0U]]
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|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1jd2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1jd2 OCA], [http://www.ebi.ac.uk/pdbsum/1jd2 PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1jd2 RCSB]</span>
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}}
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'''Crystal Structure of the yeast 20S Proteasome:TMC-95A complex: A non-covalent Proteasome Inhibitor'''
'''Crystal Structure of the yeast 20S Proteasome:TMC-95A complex: A non-covalent Proteasome Inhibitor'''
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[[Category: Koguchi, Y.]]
[[Category: Koguchi, Y.]]
[[Category: Kohno, J.]]
[[Category: Kohno, J.]]
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[[Category: beta-sandwich]]
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[[Category: Beta-sandwich]]
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[[Category: proteasome:inhibitor complex]]
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[[Category: Proteasome:inhibitor complex]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Fri May 2 21:04:33 2008''
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Mar 30 21:31:55 2008''
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Revision as of 18:04, 2 May 2008

Template:STRUCTURE 1jd2

Crystal Structure of the yeast 20S Proteasome:TMC-95A complex: A non-covalent Proteasome Inhibitor


Overview

The 20 S proteasome core particle (CP), a multicatalytic protease, is involved in a variety of biologically important processes, including immune response, cell-cycle control, metabolic adaptation, stress response and cell differentiation. Therefore, selective inhibition of the CP will be one possible way to influence these essential pathways. Recently, a new class of specific proteasome inhibitors, TMC-95s, was investigated and we now present a biochemical and crystallographic characterisation of the yeast proteasome core particle in complex with the natural product TMC-95A. This unusual heterocyclic compound specifically blocks the active sites of CPs non-covalently, without modifying the nucleophilic Thr1 residue. The inhibitor is bound to the CP by specific hydrogen bonds with the main-chain atoms of the protein. Analysis of the crystal structure of the complex has revealed which portions of TMC-95s are essential for binding to the proteasome. This will form the basis for the development of synthetic selective proteasome inhibitors as promising candidates for anti-tumoral or anti-inflammatory drugs.

About this Structure

1JD2 is a Protein complex structure of sequences from Saccharomyces cerevisiae. Full crystallographic information is available from OCA.

Reference

Crystal structure of the 20 S proteasome:TMC-95A complex: a non-covalent proteasome inhibitor., Groll M, Koguchi Y, Huber R, Kohno J, J Mol Biol. 2001 Aug 17;311(3):543-8. PMID:11493007 Page seeded by OCA on Fri May 2 21:04:33 2008

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