4lvg

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 1: Line 1:
==Fragment-based Identification of Amides Derived From trans-2-(Pyridin-3-yl)cyclopropanecarboxylic Acid as Potent Inhibitors of Human Nicotinamide Phosphoribosyltransferase (NAMPT)==
==Fragment-based Identification of Amides Derived From trans-2-(Pyridin-3-yl)cyclopropanecarboxylic Acid as Potent Inhibitors of Human Nicotinamide Phosphoribosyltransferase (NAMPT)==
-
<StructureSection load='4lvg' size='340' side='right' caption='[[4lvg]], [[Resolution|resolution]] 1.70&Aring;' scene=''>
+
<StructureSection load='4lvg' size='340' side='right'caption='[[4lvg]], [[Resolution|resolution]] 1.70&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[4lvg]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Human Human]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4LVG OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4LVG FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[4lvg]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4LVG OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4LVG FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=20O:(1S,2S)-N-[4-(PHENYLSULFONYL)PHENYL]-2-(PYRIDIN-3-YL)CYCLOPROPANECARBOXAMIDE'>20O</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
+
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=20O:(1S,2S)-N-[4-(PHENYLSULFONYL)PHENYL]-2-(PYRIDIN-3-YL)CYCLOPROPANECARBOXAMIDE'>20O</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[4lv9|4lv9]], [[4lva|4lva]], [[4lvb|4lvb]], [[4lvd|4lvd]], [[4lvf|4lvf]], [[4m6p|4m6p]], [[4m6q|4m6q]]</td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4lvg FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4lvg OCA], [https://pdbe.org/4lvg PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4lvg RCSB], [https://www.ebi.ac.uk/pdbsum/4lvg PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4lvg ProSAT]</span></td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">NAMPT, PBEF, PBEF1 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 HUMAN])</td></tr>
+
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Nicotinamide_phosphoribosyltransferase Nicotinamide phosphoribosyltransferase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.4.2.12 2.4.2.12] </span></td></tr>
+
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4lvg FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4lvg OCA], [http://pdbe.org/4lvg PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4lvg RCSB], [http://www.ebi.ac.uk/pdbsum/4lvg PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4lvg ProSAT]</span></td></tr>
+
</table>
</table>
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/NAMPT_HUMAN NAMPT_HUMAN]] Catalyzes the condensation of nicotinamide with 5-phosphoribosyl-1-pyrophosphate to yield nicotinamide mononucleotide, an intermediate in the biosynthesis of NAD. It is the rate limiting component in the mammalian NAD biosynthesis pathway (By similarity).
+
[https://www.uniprot.org/uniprot/NAMPT_HUMAN NAMPT_HUMAN] Catalyzes the condensation of nicotinamide with 5-phosphoribosyl-1-pyrophosphate to yield nicotinamide mononucleotide, an intermediate in the biosynthesis of NAD. It is the rate limiting component in the mammalian NAD biosynthesis pathway (By similarity).
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 21: Line 18:
</div>
</div>
<div class="pdbe-citations 4lvg" style="background-color:#fffaf0;"></div>
<div class="pdbe-citations 4lvg" style="background-color:#fffaf0;"></div>
 +
 +
==See Also==
 +
*[[Phosphoribosyltransferase 3D structures|Phosphoribosyltransferase 3D structures]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Human]]
+
[[Category: Homo sapiens]]
-
[[Category: Nicotinamide phosphoribosyltransferase]]
+
[[Category: Large Structures]]
-
[[Category: Bravo, B]]
+
[[Category: Bravo B]]
-
[[Category: Brien, T O]]
+
[[Category: Dragovich PS]]
-
[[Category: Dragovich, P S]]
+
[[Category: Feng Y]]
-
[[Category: Feng, Y]]
+
[[Category: Giannetti AM]]
-
[[Category: Giannetti, A M]]
+
[[Category: Gunzner-Toste J]]
-
[[Category: Gunzner-Toste, J]]
+
[[Category: Ho Y]]
-
[[Category: Ho, Y]]
+
[[Category: Hua R]]
-
[[Category: Hua, R]]
+
[[Category: Liederer BM]]
-
[[Category: Liederer, B M]]
+
[[Category: Liu Y]]
-
[[Category: Liu, Y]]
+
[[Category: O'Brien T]]
-
[[Category: Oeh, J]]
+
[[Category: Oeh J]]
-
[[Category: Sampath, D]]
+
[[Category: Sampath D]]
-
[[Category: Shen, Y]]
+
[[Category: Shen Y]]
-
[[Category: Skelton, N]]
+
[[Category: Skelton N]]
-
[[Category: Wang, C]]
+
[[Category: Wang C]]
-
[[Category: Wang, L]]
+
[[Category: Wang L]]
-
[[Category: Wang, W]]
+
[[Category: Wang W]]
-
[[Category: Wu, H]]
+
[[Category: Wu H]]
-
[[Category: Xiao, Y]]
+
[[Category: Xiao Y]]
-
[[Category: Yuen, P]]
+
[[Category: Yuen P]]
-
[[Category: Zak, M]]
+
[[Category: Zak M]]
-
[[Category: Zhao, G]]
+
[[Category: Zhao G]]
-
[[Category: Zhao, Q]]
+
[[Category: Zhao Q]]
-
[[Category: Zheng, X]]
+
[[Category: Zheng X]]
-
[[Category: Transferase]]
+
-
[[Category: Transferase-transferase inhibitor complex]]
+

Revision as of 10:35, 21 December 2022

Fragment-based Identification of Amides Derived From trans-2-(Pyridin-3-yl)cyclopropanecarboxylic Acid as Potent Inhibitors of Human Nicotinamide Phosphoribosyltransferase (NAMPT)

PDB ID 4lvg

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools