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4ly6

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{{Large structure}}
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==Nucleotide-induced asymmetry within ATPase activator ring drives s54-RNAP interaction and ATP hydrolysis==
==Nucleotide-induced asymmetry within ATPase activator ring drives s54-RNAP interaction and ATP hydrolysis==
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<StructureSection load='4ly6' size='340' side='right' caption='[[4ly6]], [[Resolution|resolution]] 3.60&Aring;' scene=''>
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<StructureSection load='4ly6' size='340' side='right'caption='[[4ly6]], [[Resolution|resolution]] 3.60&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[4ly6]] is a 24 chain structure with sequence from [http://en.wikipedia.org/wiki/"aquifex_aeolicus"_huber_and_stetter_2001 "aquifex aeolicus" huber and stetter 2001]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4LY6 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4LY6 FirstGlance]. <br>
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<table><tr><td colspan='2'>[[4ly6]] is a 24 chain structure with sequence from [https://en.wikipedia.org/wiki/Aquifex_aeolicus Aquifex aeolicus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4LY6 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4LY6 FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=08T:[[[(2R,3S,4R,5R)-5-(6-AMINOPURIN-9-YL)-3,4-BIS(OXIDANYL)OXOLAN-2-YL]METHOXY-OXIDANYL-PHOSPHORYL]OXY-OXIDANYL-PHOSPHORYL]OXY-TRIS(FLUORANYL)BERYLLIUM'>08T</scene>, <scene name='pdbligand=ADP:ADENOSINE-5-DIPHOSPHATE'>ADP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=08T:[[[(2R,3S,4R,5R)-5-(6-AMINOPURIN-9-YL)-3,4-BIS(OXIDANYL)OXOLAN-2-YL]METHOXY-OXIDANYL-PHOSPHORYL]OXY-OXIDANYL-PHOSPHORYL]OXY-TRIS(FLUORANYL)BERYLLIUM'>08T</scene>, <scene name='pdbligand=ADP:ADENOSINE-5-DIPHOSPHATE'>ADP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
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<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[4lzz|4lzz]]</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4ly6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4ly6 OCA], [https://pdbe.org/4ly6 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4ly6 RCSB], [https://www.ebi.ac.uk/pdbsum/4ly6 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4ly6 ProSAT]</span></td></tr>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">aq_1117, ntrC1 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=63363 "Aquifex aeolicus" Huber and Stetter 2001])</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4ly6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4ly6 OCA], [http://pdbe.org/4ly6 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4ly6 RCSB], [http://www.ebi.ac.uk/pdbsum/4ly6 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4ly6 ProSAT]</span></td></tr>
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</table>
</table>
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{{Large structure}}
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== Function ==
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[https://www.uniprot.org/uniprot/O67198_AQUAE O67198_AQUAE]
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
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__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Aquifex aeolicus huber and stetter 2001]]
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[[Category: Aquifex aeolicus]]
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[[Category: Chowdhury, S]]
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[[Category: Large Structures]]
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[[Category: Guo, L]]
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[[Category: Chowdhury S]]
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[[Category: Nixon, B T]]
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[[Category: Guo L]]
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[[Category: Sysoeva, T A]]
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[[Category: Nixon BT]]
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[[Category: Aaa+ atpase]]
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[[Category: Sysoeva TA]]
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[[Category: Bacterial enhancer binding protein]]
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[[Category: Molecular machine]]
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[[Category: S54-dependent transcription activator]]
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[[Category: S54-rnap]]
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[[Category: Sigma54]]
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[[Category: Transcription regulator]]
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Revision as of 10:39, 21 December 2022

Nucleotide-induced asymmetry within ATPase activator ring drives s54-RNAP interaction and ATP hydrolysis

PDB ID 4ly6

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