4m5f

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 1: Line 1:
==complex structure of Tse3-Tsi3==
==complex structure of Tse3-Tsi3==
-
<StructureSection load='4m5f' size='340' side='right' caption='[[4m5f]], [[Resolution|resolution]] 2.50&Aring;' scene=''>
+
<StructureSection load='4m5f' size='340' side='right'caption='[[4m5f]], [[Resolution|resolution]] 2.50&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[4m5f]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Pseae Pseae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4M5F OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4M5F FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[4m5f]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Pseudomonas_aeruginosa_PAO1 Pseudomonas aeruginosa PAO1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4M5F OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4M5F FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
+
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[4m5e|4m5e]], [[4n7s|4n7s]], [[4n80|4n80]]</td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4m5f FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4m5f OCA], [https://pdbe.org/4m5f PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4m5f RCSB], [https://www.ebi.ac.uk/pdbsum/4m5f PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4m5f ProSAT]</span></td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">PA3484 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=208964 PSEAE]), PA3485 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=208964 PSEAE])</td></tr>
+
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4m5f FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4m5f OCA], [http://pdbe.org/4m5f PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4m5f RCSB], [http://www.ebi.ac.uk/pdbsum/4m5f PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4m5f ProSAT]</span></td></tr>
+
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/TSE3_PSEAE TSE3_PSEAE] Toxin secreted by the H1 type VI (H1-T6SS) secretion system into the periplasm of recipient cells. Degrades peptidoglycan via muramidase activity thereby helping itself to compete with other bacteria (PubMed:21776080). To protect itself, the bacterium synthesizes immunity protein Tsi3 that specifically interacts with and inactivates cognate toxin (PubMed:24025333).<ref>PMID:21776080</ref> <ref>PMID:24025333</ref>
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 22: Line 22:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Pseae]]
+
[[Category: Large Structures]]
-
[[Category: Gu, L C]]
+
[[Category: Pseudomonas aeruginosa PAO1]]
-
[[Category: Beta-sheet]]
+
[[Category: Gu LC]]
-
[[Category: Hydrolase inhibitor]]
+

Revision as of 10:57, 21 December 2022

complex structure of Tse3-Tsi3

PDB ID 4m5f

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools