We apologize for Proteopedia being slow to respond. For the past two years, a new implementation of Proteopedia has been being built. Soon, it will replace this 18-year old system. All existing content will be moved to the new system at a date that will be announced here.

4mdp

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 3: Line 3:
<StructureSection load='4mdp' size='340' side='right'caption='[[4mdp]], [[Resolution|resolution]] 2.05&Aring;' scene=''>
<StructureSection load='4mdp' size='340' side='right'caption='[[4mdp]], [[Resolution|resolution]] 2.05&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[4mdp]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Atcc_16453 Atcc 16453]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4MDP OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4MDP FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[4mdp]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Humicola_grisea_var._thermoidea Humicola grisea var. thermoidea]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4MDP OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4MDP FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=BGC:BETA-D-GLUCOSE'>BGC</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=PEG:DI(HYDROXYETHYL)ETHER'>PEG</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
+
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BGC:BETA-D-GLUCOSE'>BGC</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=PEG:DI(HYDROXYETHYL)ETHER'>PEG</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[4mdo|4mdo]]</td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4mdp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4mdp OCA], [https://pdbe.org/4mdp PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4mdp RCSB], [https://www.ebi.ac.uk/pdbsum/4mdp PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4mdp ProSAT]</span></td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">bgl4 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=5528 ATCC 16453])</td></tr>
+
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4mdp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4mdp OCA], [http://pdbe.org/4mdp PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4mdp RCSB], [http://www.ebi.ac.uk/pdbsum/4mdp PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4mdp ProSAT]</span></td></tr>
+
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/O93784_HUMGT O93784_HUMGT]
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 25: Line 25:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Atcc 16453]]
 
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Furriel, R P.M]]
+
[[Category: Furriel RPM]]
-
[[Category: Giuseppe, P O]]
+
[[Category: Giuseppe PO]]
-
[[Category: Jorge, J A]]
+
[[Category: Jorge JA]]
-
[[Category: Machado, C B]]
+
[[Category: Machado CB]]
-
[[Category: Murakami, M T]]
+
[[Category: Murakami MT]]
-
[[Category: Souza, F H.M]]
+
[[Category: Souza FHM]]
-
[[Category: Souza, T A.C B]]
+
[[Category: Souza TACB]]
-
[[Category: Ward, R J]]
+
[[Category: Ward RJ]]
-
[[Category: Zanphorlin, L M]]
+
[[Category: Zanphorlin LM]]
-
[[Category: Glycoside hydrolase family 1]]
+
-
[[Category: Hydrolase]]
+
-
[[Category: Retaining enzyme]]
+
-
[[Category: Tim barrel]]
+

Revision as of 11:11, 21 December 2022

Crystal structure of a GH1 beta-glucosidase from the fungus Humicola insolens in complex with glucose

PDB ID 4mdp

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools