7vo7
From Proteopedia
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| - | ==== | + | ==Crystal structure of trypsin in complex with Lima bean trypsin inhibitor at 2.25A resolution.== |
| - | <StructureSection load='7vo7' size='340' side='right'caption='[[7vo7]]' scene=''> | + | <StructureSection load='7vo7' size='340' side='right'caption='[[7vo7]], [[Resolution|resolution]] 2.25Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id= OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol= FirstGlance]. <br> | + | <table><tr><td colspan='2'>[[7vo7]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Bos_taurus Bos taurus] and [https://en.wikipedia.org/wiki/Phaseolus_lunatus Phaseolus lunatus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7VO7 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7VO7 FirstGlance]. <br> |
| - | </td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7vo7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7vo7 OCA], [https://pdbe.org/7vo7 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7vo7 RCSB], [https://www.ebi.ac.uk/pdbsum/7vo7 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7vo7 ProSAT]</span></td></tr> | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr> |
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7vo7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7vo7 OCA], [https://pdbe.org/7vo7 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7vo7 RCSB], [https://www.ebi.ac.uk/pdbsum/7vo7 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7vo7 ProSAT]</span></td></tr> | ||
</table> | </table> | ||
| + | == Function == | ||
| + | [https://www.uniprot.org/uniprot/TRY1_BOVIN TRY1_BOVIN] | ||
| + | <div style="background-color:#fffaf0;"> | ||
| + | == Publication Abstract from PubMed == | ||
| + | Bovine pancreatic trypsin was crystallized, in-complex with Lima bean trypsin inhibitor (LBTI) (Phaseolus lunatus L.), in the form of a ternary complex. LBTI is a Bowman-Birk-type bifunctional serine protease inhibitor, which has two independent inhibitory loops. Both of the loops can inhibit trypsin, however, only the hydrophobic loop is specific for inhibiting chymotrypsin. The structure of trypsin incomplex with the LBTI has been solved and refined at 2.25 A resolution, in the space group P4(1,) with R(work) /R(free) values of 18.1/23.3. The two binding sites of LBTI differ in only two amino acids. Lysine and leucine are the key residues of the two different binding loops positioned at the P1, and involved in binding the S1 binding site of trypsin. The asymmetric unit cell contains two molecules of trypsin and one molecule of LBTI. The key interactions include hydrogen bonds between LBTI and active site residues of trypsin. The 3D structure of the enzyme-inhibitor complex provided details insight into the trypsin inhibition by LBTI. To the best of our knowledge, this is the first report on the structure of trypsin incomplex with LBTI. | ||
| + | |||
| + | Insight into the structural basis of the dual inhibitory mode of Lima bean (Phaseolus lunatus) serine protease inhibitor.,Ahmad MS, Akbar Z, Choudhary MI Proteins. 2023 Jan;91(1):22-31. doi: 10.1002/prot.26407. Epub 2022 Aug 23. PMID:35927030<ref>PMID:35927030</ref> | ||
| + | |||
| + | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | ||
| + | </div> | ||
| + | <div class="pdbe-citations 7vo7" style="background-color:#fffaf0;"></div> | ||
| + | == References == | ||
| + | <references/> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
| + | [[Category: Bos taurus]] | ||
[[Category: Large Structures]] | [[Category: Large Structures]] | ||
| - | [[Category: Z | + | [[Category: Phaseolus lunatus]] |
| + | [[Category: Ahmad MS]] | ||
| + | [[Category: Akbar Z]] | ||
| + | [[Category: Choudhary MI]] | ||
Revision as of 09:16, 28 December 2022
Crystal structure of trypsin in complex with Lima bean trypsin inhibitor at 2.25A resolution.
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