|
|
Line 3: |
Line 3: |
| <StructureSection load='4myn' size='340' side='right'caption='[[4myn]], [[Resolution|resolution]] 1.80Å' scene=''> | | <StructureSection load='4myn' size='340' side='right'caption='[[4myn]], [[Resolution|resolution]] 1.80Å' scene=''> |
| == Structural highlights == | | == Structural highlights == |
- | <table><tr><td colspan='2'>[[4myn]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Trycr Trycr]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4MYN OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4MYN FirstGlance]. <br> | + | <table><tr><td colspan='2'>[[4myn]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Trypanosoma_cruzi Trypanosoma cruzi]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4MYN OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4MYN FirstGlance]. <br> |
- | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=MN:MANGANESE+(II)+ION'>MN</scene></td></tr> | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MN:MANGANESE+(II)+ION'>MN</scene></td></tr> |
- | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[4mxr|4mxr]], [[4myf|4myf]], [[4myk|4myk]], [[4myl|4myl]]</td></tr>
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4myn FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4myn OCA], [https://pdbe.org/4myn PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4myn RCSB], [https://www.ebi.ac.uk/pdbsum/4myn PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4myn ProSAT]</span></td></tr> |
- | <tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Formimidoylglutamase Formimidoylglutamase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.5.3.8 3.5.3.8] </span></td></tr>
| + | |
- | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4myn FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4myn OCA], [http://pdbe.org/4myn PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4myn RCSB], [http://www.ebi.ac.uk/pdbsum/4myn PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4myn ProSAT]</span></td></tr> | + | |
| </table> | | </table> |
| + | == Function == |
| + | [https://www.uniprot.org/uniprot/Q4DSA0_TRYCC Q4DSA0_TRYCC] |
| <div style="background-color:#fffaf0;"> | | <div style="background-color:#fffaf0;"> |
| == Publication Abstract from PubMed == | | == Publication Abstract from PubMed == |
Line 22: |
Line 22: |
| __TOC__ | | __TOC__ |
| </StructureSection> | | </StructureSection> |
- | [[Category: Formimidoylglutamase]] | |
| [[Category: Large Structures]] | | [[Category: Large Structures]] |
- | [[Category: Trycr]] | + | [[Category: Trypanosoma cruzi]] |
- | [[Category: Christianson, D W]] | + | [[Category: Christianson DW]] |
- | [[Category: Dugery, R J]] | + | [[Category: Dugery RJ]] |
- | [[Category: Hai, Y]] | + | [[Category: Hai Y]] |
- | [[Category: Healy, D]] | + | [[Category: Healy D]] |
- | [[Category: Hydrolase]]
| + | |
| Structural highlights
Function
Q4DSA0_TRYCC
Publication Abstract from PubMed
The crystal structure of formiminoglutamase from Trypanosoma cruzi (TcFIGase) is reported at 1.85 A resolution. Although the structure of this enzyme was previously determined by the Structural Genomics of Pathogenic Protozoa Consortium (PDB accession code 2A0M), this structure was determined at low pH and lacked bound metal ions; accordingly, the protein was simply annotated as "arginase superfamily protein" with undetermined function. We show that reconstitution of this protein with Mn(2+) confers maximal catalytic activity in the hydrolysis of formiminoglutamate to yield glutamate and formamide, thereby demonstrating that this protein is a metal-dependent formiminoglutamase. Equilibration of TcFIGase crystals with MnCl2 at higher pH yields a binuclear manganese cluster similar to that observed in arginase, except that the histidine ligand to the Mn(2+)A ion of arginase is an asparagine ligand (N114) to the Mn(2+)A ion of TcFIGase. The crystal structure of N114H TcFIGase reveals a binuclear manganese cluster essentially identical to that of arginase, but the mutant exhibits a modest 35% loss of catalytic efficiency (kcat/KM). Interestingly, when TcFIGase is prepared and crystallized in the absence of reducing agents at low pH, a disulfide linkage forms between C35 and C242 in the active site. When reconstituted with Mn(2+) at higher pH, this oxidized enzyme exhibits a modest 33% loss of catalytic efficiency. Structure determinations of the metal-free and metal-bound forms of oxidized TcFIGase reveal that although disulfide formation constricts the main entrance to the active site, other structural changes open alternative channels to the active site that may help sustain catalytic activity.
Formiminoglutamase from trypanosoma cruzi is an arginase-like manganese metalloenzyme.,Hai Y, Dugery RJ, Healy D, Christianson DW Biochemistry. 2013 Dec 23;52(51):9294-309. doi: 10.1021/bi401352h. Epub 2013 Nov , 21. PMID:24261485[1]
From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.
References
- ↑ Hai Y, Dugery RJ, Healy D, Christianson DW. Formiminoglutamase from trypanosoma cruzi is an arginase-like manganese metalloenzyme. Biochemistry. 2013 Dec 23;52(51):9294-309. doi: 10.1021/bi401352h. Epub 2013 Nov , 21. PMID:24261485 doi:http://dx.doi.org/10.1021/bi401352h
|