This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


1jiw

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 1: Line 1:
[[Image:1jiw.jpg|left|200px]]
[[Image:1jiw.jpg|left|200px]]
-
{{Structure
+
<!--
-
|PDB= 1jiw |SIZE=350|CAPTION= <scene name='initialview01'>1jiw</scene>, resolution 1.74&Aring;
+
The line below this paragraph, containing "STRUCTURE_1jiw", creates the "Structure Box" on the page.
-
|SITE=
+
You may change the PDB parameter (which sets the PDB file loaded into the applet)
-
|LIGAND= <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene>
+
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
-
|ACTIVITY=
+
or leave the SCENE parameter empty for the default display.
-
|GENE=
+
-->
-
|DOMAIN=
+
{{STRUCTURE_1jiw| PDB=1jiw | SCENE= }}
-
|RELATEDENTRY=[[1smp|1SMP]]
+
-
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1jiw FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1jiw OCA], [http://www.ebi.ac.uk/pdbsum/1jiw PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1jiw RCSB]</span>
+
-
}}
+
'''Crystal structure of the APR-APRin complex'''
'''Crystal structure of the APR-APRin complex'''
Line 29: Line 26:
[[Category: Gray, R D.]]
[[Category: Gray, R D.]]
[[Category: Hege, T.]]
[[Category: Hege, T.]]
-
[[Category: pseudomonas aeruginosa alkaline protease inhibitor]]
+
[[Category: Pseudomonas aeruginosa alkaline protease inhibitor]]
-
 
+
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Fri May 2 21:16:40 2008''
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Mar 30 21:34:23 2008''
+

Revision as of 18:16, 2 May 2008

Template:STRUCTURE 1jiw

Crystal structure of the APR-APRin complex


Overview

Serralysins are a family of metalloproteases secreted by Gram-negative bacteria into the medium in the form of inactive zymogens. Usually, all serralysin secretors have on the same operon a gene coding for a periplasmic 10-kDa protein, which is an inhibitor of the secreted protease. The recent characterization of the inhibitor of the alkaline protease from Pseudomonas aeruginosa revealed a surprisingly low dissociation constant of 4 pm, contrary to earlier studies on homologous systems, where inhibition constants in the microm range were reported. To approach a more accurate understanding, the crystal structure of the complex between inhibitor and protease from P. aeruginosa was determined at 1.74 A resolution and refined to R(free) = 0.204. The structure reported here shows clearly that the N terminus of the inhibitor forms a coordinative bond to the catalytic Zn(2+) ion with a nitrogen-zinc distance of 2.17 A. We conclude that this interaction adds substantially to the complex stability and show also that similar interactions are found in other metzincin-inhibitor complexes.

About this Structure

1JIW is a Protein complex structure of sequences from Pseudomonas aeruginosa. Full crystallographic information is available from OCA.

Reference

Crystal structure of a complex between Pseudomonas aeruginosa alkaline protease and its cognate inhibitor: inhibition by a zinc-NH2 coordinative bond., Hege T, Feltzer RE, Gray RD, Baumann U, J Biol Chem. 2001 Sep 14;276(37):35087-92. Epub 2001 Jul 9. PMID:11445573 Page seeded by OCA on Fri May 2 21:16:40 2008

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools