This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


4nas

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (08:18, 11 January 2023) (edit) (undo)
 
Line 1: Line 1:
==The crystal structure of a rubisco-like protein (MtnW) from Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446==
==The crystal structure of a rubisco-like protein (MtnW) from Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446==
-
<StructureSection load='4nas' size='340' side='right' caption='[[4nas]], [[Resolution|resolution]] 1.92&Aring;' scene=''>
+
<StructureSection load='4nas' size='340' side='right'caption='[[4nas]], [[Resolution|resolution]] 1.92&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[4nas]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Aliad Aliad]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4NAS OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4NAS FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[4nas]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Alicyclobacillus_acidocaldarius_subsp._acidocaldarius_DSM_446 Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4NAS OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4NAS FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=FMT:FORMIC+ACID'>FMT</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene></td></tr>
+
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=FMT:FORMIC+ACID'>FMT</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=KCX:LYSINE+NZ-CARBOXYLIC+ACID'>KCX</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=KCX:LYSINE+NZ-CARBOXYLIC+ACID'>KCX</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4nas FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4nas OCA], [https://pdbe.org/4nas PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4nas RCSB], [https://www.ebi.ac.uk/pdbsum/4nas PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4nas ProSAT]</span></td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">Aaci_0096 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=521098 ALIAD])</td></tr>
+
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Ribulose-bisphosphate_carboxylase Ribulose-bisphosphate carboxylase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.1.1.39 4.1.1.39] </span></td></tr>
+
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4nas FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4nas OCA], [http://pdbe.org/4nas PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4nas RCSB], [http://www.ebi.ac.uk/pdbsum/4nas PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4nas ProSAT]</span></td></tr>
+
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/C8WQ56_ALIAD C8WQ56_ALIAD]
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Aliad]]
+
[[Category: Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446]]
-
[[Category: Ribulose-bisphosphate carboxylase]]
+
[[Category: Large Structures]]
-
[[Category: Clancy, S]]
+
[[Category: Clancy S]]
-
[[Category: Joachimiak, A]]
+
[[Category: Joachimiak A]]
-
[[Category: Li, H]]
+
[[Category: Li H]]
-
[[Category: Structural genomic]]
+
[[Category: Tan K]]
-
[[Category: Tan, K]]
+
-
[[Category: Lyase]]
+
-
[[Category: Mcsg]]
+
-
[[Category: PSI, Protein structure initiative]]
+
-
[[Category: Psi-biology]]
+

Current revision

The crystal structure of a rubisco-like protein (MtnW) from Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446

PDB ID 4nas

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools