This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


4nel

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 1: Line 1:
==Crystal structure of a putative transcriptional regulator from Saccharomonospora viridis in complex with N,N-dimethylmethanamine==
==Crystal structure of a putative transcriptional regulator from Saccharomonospora viridis in complex with N,N-dimethylmethanamine==
-
<StructureSection load='4nel' size='340' side='right' caption='[[4nel]], [[Resolution|resolution]] 2.05&Aring;' scene=''>
+
<StructureSection load='4nel' size='340' side='right'caption='[[4nel]], [[Resolution|resolution]] 2.05&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[4nel]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Sacvd Sacvd]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4NEL OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4NEL FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[4nel]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Saccharomonospora_viridis_DSM_43017 Saccharomonospora viridis DSM 43017]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4NEL OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4NEL FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=KEN:N,N-DIMETHYLMETHANAMINE'>KEN</scene></td></tr>
+
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CME:S,S-(2-HYDROXYETHYL)THIOCYSTEINE'>CME</scene>, <scene name='pdbligand=KEN:N,N-DIMETHYLMETHANAMINE'>KEN</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=CME:S,S-(2-HYDROXYETHYL)THIOCYSTEINE'>CME</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4nel FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4nel OCA], [https://pdbe.org/4nel PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4nel RCSB], [https://www.ebi.ac.uk/pdbsum/4nel PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4nel ProSAT]</span></td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[4ich|4ich]], [[4jnn|4jnn]], [[4kwa|4kwa]]</td></tr>
+
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">Svir_16270 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=471857 SACVD])</td></tr>
+
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4nel FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4nel OCA], [http://pdbe.org/4nel PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4nel RCSB], [http://www.ebi.ac.uk/pdbsum/4nel PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4nel ProSAT]</span></td></tr>
+
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/C7MT25_SACVD C7MT25_SACVD]
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Sacvd]]
+
[[Category: Large Structures]]
-
[[Category: Anderson, W F]]
+
[[Category: Saccharomonospora viridis DSM 43017]]
-
[[Category: Endres, M]]
+
[[Category: Anderson WF]]
-
[[Category: Filippova, E V]]
+
[[Category: Endres M]]
-
[[Category: Halavaty, A S]]
+
[[Category: Filippova EV]]
-
[[Category: Joachimiak, A]]
+
[[Category: Halavaty AS]]
-
[[Category: Kiryukhina, O]]
+
[[Category: Joachimiak A]]
-
[[Category: Structural genomic]]
+
[[Category: Kiryukhina O]]
-
[[Category: Minasov, G]]
+
[[Category: Minasov G]]
-
[[Category: Shuvalova, L]]
+
[[Category: Shuvalova L]]
-
[[Category: Mcsg]]
+
-
[[Category: Psi-biology]]
+
-
[[Category: Transcription regulator]]
+

Revision as of 08:25, 11 January 2023

Crystal structure of a putative transcriptional regulator from Saccharomonospora viridis in complex with N,N-dimethylmethanamine

PDB ID 4nel

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools