This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


4nqq

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 1: Line 1:
==Crystal structure of mouse P-cadherin extracellular domains EC1-EC2==
==Crystal structure of mouse P-cadherin extracellular domains EC1-EC2==
-
<StructureSection load='4nqq' size='340' side='right' caption='[[4nqq]], [[Resolution|resolution]] 3.20&Aring;' scene=''>
+
<StructureSection load='4nqq' size='340' side='right'caption='[[4nqq]], [[Resolution|resolution]] 3.20&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[4nqq]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Lk3_transgenic_mice Lk3 transgenic mice]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4NQQ OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4NQQ FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[4nqq]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4NQQ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4NQQ FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=CU:COPPER+(II)+ION'>CU</scene></td></tr>
+
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=CU:COPPER+(II)+ION'>CU</scene></td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">Cdh3, Cdhp ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=10090 LK3 transgenic mice])</td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4nqq FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4nqq OCA], [https://pdbe.org/4nqq PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4nqq RCSB], [https://www.ebi.ac.uk/pdbsum/4nqq PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4nqq ProSAT]</span></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4nqq FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4nqq OCA], [http://pdbe.org/4nqq PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4nqq RCSB], [http://www.ebi.ac.uk/pdbsum/4nqq PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4nqq ProSAT]</span></td></tr>
+
</table>
</table>
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/CADH3_MOUSE CADH3_MOUSE]] Cadherins are calcium-dependent cell adhesion proteins. They preferentially interact with themselves in a homophilic manner in connecting cells; cadherins may thus contribute to the sorting of heterogeneous cell types.
+
[https://www.uniprot.org/uniprot/CADH3_MOUSE CADH3_MOUSE] Cadherins are calcium-dependent cell adhesion proteins. They preferentially interact with themselves in a homophilic manner in connecting cells; cadherins may thus contribute to the sorting of heterogeneous cell types.
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 19: Line 18:
</div>
</div>
<div class="pdbe-citations 4nqq" style="background-color:#fffaf0;"></div>
<div class="pdbe-citations 4nqq" style="background-color:#fffaf0;"></div>
 +
 +
==See Also==
 +
*[[Cadherin 3D structures|Cadherin 3D structures]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Lk3 transgenic mice]]
+
[[Category: Large Structures]]
-
[[Category: Brasch, J]]
+
[[Category: Mus musculus]]
-
[[Category: Shapiro, L]]
+
[[Category: Brasch J]]
-
[[Category: Cell adhesion]]
+
[[Category: Shapiro L]]
-
[[Category: Cell-cell adhesion]]
+

Revision as of 08:42, 11 January 2023

Crystal structure of mouse P-cadherin extracellular domains EC1-EC2

PDB ID 4nqq

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools