1jlt

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[[Image:1jlt.gif|left|200px]]
[[Image:1jlt.gif|left|200px]]
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{{Structure
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<!--
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|PDB= 1jlt |SIZE=350|CAPTION= <scene name='initialview01'>1jlt</scene>, resolution 1.4&Aring;
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The line below this paragraph, containing "STRUCTURE_1jlt", creates the "Structure Box" on the page.
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|SITE=
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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|LIGAND= <scene name='pdbligand=MPD:(4S)-2-METHYL-2,4-PENTANEDIOL'>MPD</scene>, <scene name='pdbligand=MRD:(4R)-2-METHYLPENTANE-2,4-DIOL'>MRD</scene>
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Phospholipase_A(2) Phospholipase A(2)], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.1.1.4 3.1.1.4] </span>
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or leave the SCENE parameter empty for the default display.
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|GENE=
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-->
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|DOMAIN=
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{{STRUCTURE_1jlt| PDB=1jlt | SCENE= }}
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|RELATEDENTRY=[[1aok|1AOK]]
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|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1jlt FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1jlt OCA], [http://www.ebi.ac.uk/pdbsum/1jlt PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1jlt RCSB]</span>
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}}
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'''Vipoxin Complex'''
'''Vipoxin Complex'''
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==Reference==
==Reference==
Structure of the neurotoxic complex vipoxin at 1.4 A resolution., Banumathi S, Rajashankar KR, Notzel C, Aleksiev B, Singh TP, Genov N, Betzel C, Acta Crystallogr D Biol Crystallogr. 2001 Nov;57(Pt 11):1552-9. Epub 2001, Oct 25. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/11679719 11679719]
Structure of the neurotoxic complex vipoxin at 1.4 A resolution., Banumathi S, Rajashankar KR, Notzel C, Aleksiev B, Singh TP, Genov N, Betzel C, Acta Crystallogr D Biol Crystallogr. 2001 Nov;57(Pt 11):1552-9. Epub 2001, Oct 25. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/11679719 11679719]
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[[Category: Phospholipase A(2)]]
 
[[Category: Protein complex]]
[[Category: Protein complex]]
[[Category: Vipera ammodytes ammodytes]]
[[Category: Vipera ammodytes ammodytes]]
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[[Category: Rajashankar, K R.]]
[[Category: Rajashankar, K R.]]
[[Category: Singh, T P.]]
[[Category: Singh, T P.]]
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[[Category: heterodimer complex]]
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[[Category: Heterodimer complex]]
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[[Category: hydrolase]]
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[[Category: Hydrolase]]
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[[Category: phospholipase]]
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[[Category: Phospholipase]]
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[[Category: pla2-activity]]
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[[Category: Pla2-activity]]
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[[Category: vipoxin]]
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[[Category: Vipoxin]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Fri May 2 21:22:59 2008''
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Mar 30 21:35:35 2008''
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Revision as of 18:23, 2 May 2008

Template:STRUCTURE 1jlt

Vipoxin Complex


Overview

Vipoxin is a neurotoxic postsynaptic heterodimeric complex from the venom of Vipera ammodytes meridionalis, the most toxic snake in Europe. It consists of a basic and highly toxic phospholipase A(2) and an acidic non-toxic protein inhibitor. The two polypeptide chains have the same chain length and share 62% amino-acid identity. Vipoxin is a unique example of evolution of the catalytic and toxic phospholipase A(2) functions into inhibitory and non-toxic functions. The crystal structure of the complex has been determined by the molecular-replacement method and refined to 1.4 A resolution to an R factor of 18.2%. The complex formation decreases the accessible surface area of the two subunits by approximately 1480 A(2), which results in a reduction of toxicity and catalytic activity. The catalytic and substrate-binding sites of the vipoxin phospholipase A(2) are identical or similar to those of other group I/II enzymes. Two 2-methyl-2,4-pentanediol molecules are present in the hydrophobic channel close to the active site. The two subunits lack calcium ions. The negatively charged Asp49 of the phospholipase A(2), which participates in the Ca(2+)-binding sites of other snake-venom phospholipase A(2)s, is neutralized by the side chain of Lys69 from the inhibitor. Attempts have been made to identify the toxicity region and to explain the reduced catalytic activity and toxicity of the phospholipase A(2) subunit.

About this Structure

1JLT is a Protein complex structure of sequences from Vipera ammodytes ammodytes. Full crystallographic information is available from OCA.

Reference

Structure of the neurotoxic complex vipoxin at 1.4 A resolution., Banumathi S, Rajashankar KR, Notzel C, Aleksiev B, Singh TP, Genov N, Betzel C, Acta Crystallogr D Biol Crystallogr. 2001 Nov;57(Pt 11):1552-9. Epub 2001, Oct 25. PMID:11679719 Page seeded by OCA on Fri May 2 21:22:59 2008

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