We apologize for Proteopedia being slow to respond. For the past two years, a new implementation of Proteopedia has been being built. Soon, it will replace this 18-year old system. All existing content will be moved to the new system at a date that will be announced here.

4nzl

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 1: Line 1:
==Extracellular proteins of Staphylococcus aureus inhibit the neutrophil serine proteases==
==Extracellular proteins of Staphylococcus aureus inhibit the neutrophil serine proteases==
-
<StructureSection load='4nzl' size='340' side='right' caption='[[4nzl]], [[Resolution|resolution]] 1.85&Aring;' scene=''>
+
<StructureSection load='4nzl' size='340' side='right'caption='[[4nzl]], [[Resolution|resolution]] 1.85&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[4nzl]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens] and [http://en.wikipedia.org/wiki/Staam Staam]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4NZL OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4NZL FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[4nzl]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens] and [https://en.wikipedia.org/wiki/Staphylococcus_aureus_subsp._aureus_Mu50 Staphylococcus aureus subsp. aureus Mu50]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4NZL OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4NZL FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=BMA:BETA-D-MANNOSE'>BMA</scene>, <scene name='pdbligand=FUL:BETA-L-FUCOSE'>FUL</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene></td></tr>
+
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BMA:BETA-D-MANNOSE'>BMA</scene>, <scene name='pdbligand=FUL:BETA-L-FUCOSE'>FUL</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene></td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">SAV2205 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=158878 STAAM])</td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4nzl FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4nzl OCA], [https://pdbe.org/4nzl PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4nzl RCSB], [https://www.ebi.ac.uk/pdbsum/4nzl PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4nzl ProSAT]</span></td></tr>
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Leukocyte_elastase Leukocyte elastase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.4.21.37 3.4.21.37] </span></td></tr>
+
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4nzl FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4nzl OCA], [http://pdbe.org/4nzl PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4nzl RCSB], [http://www.ebi.ac.uk/pdbsum/4nzl PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4nzl ProSAT]</span></td></tr>
+
</table>
</table>
== Disease ==
== Disease ==
-
[[http://www.uniprot.org/uniprot/ELNE_HUMAN ELNE_HUMAN]] Defects in ELANE are a cause of cyclic haematopoiesis (CH) [MIM:[http://omim.org/entry/162800 162800]]; also known as cyclic neutropenia. CH is an autosomal dominant disease in which blood-cell production from the bone marrow oscillates with 21-day periodicity. Circulating neutrophils vary between almost normal numbers and zero. During intervals of neutropenia, affected individuals are at risk for opportunistic infection. Monocytes, platelets, lymphocytes and reticulocytes also cycle with the same frequency.<ref>PMID:14673143</ref> <ref>PMID:10581030</ref> Defects in ELANE are the cause of neutropenia severe congenital autosomal dominant type 1 (SCN1) [MIM:[http://omim.org/entry/202700 202700]]. SCN1 is a disorder of hematopoiesis characterized by a maturation arrest of granulopoiesis at the level of promyelocytes with peripheral blood absolute neutrophil counts below 0.5 x 10(9)/l and early onset of severe bacterial infections.<ref>PMID:20220065</ref>
+
[https://www.uniprot.org/uniprot/ELNE_HUMAN ELNE_HUMAN] Defects in ELANE are a cause of cyclic haematopoiesis (CH) [MIM:[https://omim.org/entry/162800 162800]; also known as cyclic neutropenia. CH is an autosomal dominant disease in which blood-cell production from the bone marrow oscillates with 21-day periodicity. Circulating neutrophils vary between almost normal numbers and zero. During intervals of neutropenia, affected individuals are at risk for opportunistic infection. Monocytes, platelets, lymphocytes and reticulocytes also cycle with the same frequency.<ref>PMID:14673143</ref> <ref>PMID:10581030</ref> Defects in ELANE are the cause of neutropenia severe congenital autosomal dominant type 1 (SCN1) [MIM:[https://omim.org/entry/202700 202700]. SCN1 is a disorder of hematopoiesis characterized by a maturation arrest of granulopoiesis at the level of promyelocytes with peripheral blood absolute neutrophil counts below 0.5 x 10(9)/l and early onset of severe bacterial infections.<ref>PMID:20220065</ref>
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/ELNE_HUMAN ELNE_HUMAN]] Modifies the functions of natural killer cells, monocytes and granulocytes. Inhibits C5a-dependent neutrophil enzyme release and chemotaxis.<ref>PMID:15140022</ref>
+
[https://www.uniprot.org/uniprot/ELNE_HUMAN ELNE_HUMAN] Modifies the functions of natural killer cells, monocytes and granulocytes. Inhibits C5a-dependent neutrophil enzyme release and chemotaxis.<ref>PMID:15140022</ref>
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 22: Line 20:
</div>
</div>
<div class="pdbe-citations 4nzl" style="background-color:#fffaf0;"></div>
<div class="pdbe-citations 4nzl" style="background-color:#fffaf0;"></div>
 +
 +
==See Also==
 +
*[[Elastase 3D structures|Elastase 3D structures]]
== References ==
== References ==
<references/>
<references/>
Line 27: Line 28:
</StructureSection>
</StructureSection>
[[Category: Homo sapiens]]
[[Category: Homo sapiens]]
-
[[Category: Leukocyte elastase]]
+
[[Category: Large Structures]]
-
[[Category: Staam]]
+
[[Category: Staphylococcus aureus subsp. aureus Mu50]]
-
[[Category: Bischoff, M]]
+
[[Category: Bischoff M]]
-
[[Category: Geisbrecht, B V]]
+
[[Category: Geisbrecht BV]]
-
[[Category: Herrmann, M]]
+
[[Category: Herrmann M]]
-
[[Category: Kessel, K P.M van]]
+
[[Category: McWhorter WJ]]
-
[[Category: Koeckritz-Blickwede, M von]]
+
[[Category: Milder F]]
-
[[Category: McWhorter, W J]]
+
[[Category: Ramyar KX]]
-
[[Category: Milder, F]]
+
[[Category: Rooijakkers SHM]]
-
[[Category: Ramyar, K X]]
+
[[Category: Ruyken M]]
-
[[Category: Rooijakkers, S H.M]]
+
[[Category: Scheepmaker L]]
-
[[Category: Ruyken, M]]
+
[[Category: Stapels DAC]]
-
[[Category: Scheepmaker, L]]
+
[[Category: Van Kessel KPM]]
-
[[Category: Stapels, D A.C]]
+
[[Category: Von Koeckritz-Blickwede M]]
-
[[Category: Azurophilic granule]]
+
-
[[Category: Hydrolase-hydrolase inhibitor complex]]
+
-
[[Category: Innate immunity]]
+
-
[[Category: Primarily beta]]
+
-
[[Category: Protease inhibitor]]
+
-
[[Category: Serine protease]]
+

Revision as of 08:48, 18 January 2023

Extracellular proteins of Staphylococcus aureus inhibit the neutrophil serine proteases

PDB ID 4nzl

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools