4ocz

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 3: Line 3:
<StructureSection load='4ocz' size='340' side='right'caption='[[4ocz]], [[Resolution|resolution]] 2.94&Aring;' scene=''>
<StructureSection load='4ocz' size='340' side='right'caption='[[4ocz]], [[Resolution|resolution]] 2.94&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[4ocz]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Human Human]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4OCZ OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4OCZ FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[4ocz]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4OCZ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4OCZ FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=2RU:1-[1-(2-METHYLPROPANOYL)PIPERIDIN-4-YL]-3-[4-(TRIFLUOROMETHYL)PHENYL]UREA'>2RU</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
+
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=2RU:1-[1-(2-METHYLPROPANOYL)PIPERIDIN-4-YL]-3-[4-(TRIFLUOROMETHYL)PHENYL]UREA'>2RU</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[4od0|4od0]]</td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4ocz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4ocz OCA], [https://pdbe.org/4ocz PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4ocz RCSB], [https://www.ebi.ac.uk/pdbsum/4ocz PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4ocz ProSAT]</span></td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">EPHX2 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 HUMAN])</td></tr>
+
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4ocz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4ocz OCA], [http://pdbe.org/4ocz PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4ocz RCSB], [http://www.ebi.ac.uk/pdbsum/4ocz PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4ocz ProSAT]</span></td></tr>
+
</table>
</table>
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/HYES_HUMAN HYES_HUMAN]] Bifunctional enzyme. The C-terminal domain has epoxide hydrolase activity and acts on epoxides (alkene oxides, oxiranes) and arene oxides. Plays a role in xenobiotic metabolism by degrading potentially toxic epoxides. Also determines steady-state levels of physiological mediators. The N-terminal domain has lipid phosphatase activity, with the highest activity towards threo-9,10-phosphonooxy-hydroxy-octadecanoic acid, followed by erythro-9,10-phosphonooxy-hydroxy-octadecanoic acid, 12-phosphonooxy-octadec-9Z-enoic acid, 12-phosphonooxy-octadec-9E-enoic acid, and p-nitrophenyl phospate.<ref>PMID:12574508</ref> <ref>PMID:12574510</ref>
+
[https://www.uniprot.org/uniprot/HYES_HUMAN HYES_HUMAN] Bifunctional enzyme. The C-terminal domain has epoxide hydrolase activity and acts on epoxides (alkene oxides, oxiranes) and arene oxides. Plays a role in xenobiotic metabolism by degrading potentially toxic epoxides. Also determines steady-state levels of physiological mediators. The N-terminal domain has lipid phosphatase activity, with the highest activity towards threo-9,10-phosphonooxy-hydroxy-octadecanoic acid, followed by erythro-9,10-phosphonooxy-hydroxy-octadecanoic acid, 12-phosphonooxy-octadec-9Z-enoic acid, 12-phosphonooxy-octadec-9E-enoic acid, and p-nitrophenyl phospate.<ref>PMID:12574508</ref> <ref>PMID:12574510</ref>
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 22: Line 20:
==See Also==
==See Also==
-
*[[Epoxide hydrolase|Epoxide hydrolase]]
+
*[[Epoxide hydrolase 3D structures|Epoxide hydrolase 3D structures]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Human]]
+
[[Category: Homo sapiens]]
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Dong, H]]
+
[[Category: Dong H]]
-
[[Category: Eldin, M L]]
+
[[Category: Eldin ML]]
-
[[Category: Fu, S H]]
+
[[Category: Fu SH]]
-
[[Category: Hammock, B D]]
+
[[Category: Hammock BD]]
-
[[Category: Lee, K S.S]]
+
[[Category: Lee KSS]]
-
[[Category: Liu, J]]
+
[[Category: Liu J]]
-
[[Category: Mara, A A]]
+
[[Category: Mara AA]]
-
[[Category: Mate, C]]
+
[[Category: Mate C]]
-
[[Category: Morriseau, C]]
+
[[Category: Morriseau C]]
-
[[Category: Newcomer, M E]]
+
[[Category: Newcomer ME]]
-
[[Category: Nguyen, L]]
+
[[Category: Nguyen L]]
-
[[Category: Pakhomova, S]]
+
[[Category: Pakhomova S]]
-
[[Category: Ulu, A]]
+
[[Category: Ulu A]]
-
[[Category: Wagner, K M]]
+
[[Category: Wagner KM]]
-
[[Category: Wang, P]]
+
[[Category: Wang P]]
-
[[Category: Wullf, H]]
+
[[Category: Wullf H]]
-
[[Category: Yang, J]]
+
[[Category: Yang J]]
-
[[Category: Zeldin, D C]]
+
[[Category: Zeldin DC]]
-
[[Category: Domain-swapped dimer]]
+
-
[[Category: Hydrolase-hydrolase inhibitor complex]]
+

Revision as of 07:17, 25 January 2023

Crystal structure of human soluble epoxide hydrolase complexed with 1-(1-isobutyrylpiperidin-4-yl)-3-(4-(trifluoromethyl)phenyl)urea

PDB ID 4ocz

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools